Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYSTQ99698 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
LYSTQ99698 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LYSTQ99698 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYSTQ99698 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYSTQ99698 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYSTQ99698 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYSTQ99698 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYSTQ99698 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYSTQ99698 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
LYSTQ99698 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYSTQ99698 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.08□□□□□ -0.48
LYSTQ99698 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.08□□□□□ -0.48
LYSTQ99698 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.08□□□□□ -0.48
LYSTQ99698 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.08□□□□□ -0.48
LYSTQ99698 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.08□□□□□ -0.48
LYSTQ99698 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.08□□□□□ -0.48
LYSTQ99698 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LYSTQ99698 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYSTQ99698 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYSTQ99698 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYSTQ99698 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LYSTQ99698 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.08□□□□□ -0.48
LYSTQ99698 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYSTQ99698 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LYSTQ99698 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYSTQ99698 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYSTQ99698 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC12.07□□□□□ -0.48
LYSTQ99698 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
LYSTQ99698 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.07□□□□□ -0.48
LYSTQ99698 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 KLF2P3-201ENST00000451977 1087 ntBASIC12.07□□□□□ -0.48
LYSTQ99698 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
LYSTQ99698 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.07□□□□□ -0.48
LYSTQ99698 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.07□□□□□ -0.48
LYSTQ99698 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.07□□□□□ -0.48
LYSTQ99698 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 FAM58CP-201ENST00000435741 640 ntBASIC12.07□□□□□ -0.48
LYSTQ99698 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.07□□□□□ -0.48
LYSTQ99698 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.07□□□□□ -0.48
LYSTQ99698 KRT8P48-201ENST00000515599 1220 ntBASIC12.07□□□□□ -0.48
LYSTQ99698 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 AP001059.3-201ENST00000619053 235 ntBASIC12.07□□□□□ -0.48
LYSTQ99698 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC12.07□□□□□ -0.48
LYSTQ99698 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC12.07□□□□□ -0.48
LYSTQ99698 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
LYSTQ99698 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.07□□□□□ -0.48
LYSTQ99698 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.07□□□□□ -0.48
LYSTQ99698 SPTLC1P1-201ENST00000447199 261 ntBASIC12.07□□□□□ -0.48
LYSTQ99698 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.07□□□□□ -0.48
LYSTQ99698 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.07□□□□□ -0.48
LYSTQ99698 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 AC087289.5-201ENST00000586076 3175 ntBASIC12.07□□□□□ -0.48
LYSTQ99698 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LYSTQ99698 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LYSTQ99698 AC098818.2-201ENST00000564925 2320 ntBASIC12.06□□□□□ -0.48
LYSTQ99698 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LYSTQ99698 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.06□□□□□ -0.48
LYSTQ99698 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LYSTQ99698 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.06□□□□□ -0.48
LYSTQ99698 BASP1P1-201ENST00000430708 665 ntBASIC12.06□□□□□ -0.48
LYSTQ99698 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.06□□□□□ -0.48
LYSTQ99698 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LYSTQ99698 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LYSTQ99698 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.06□□□□□ -0.48
LYSTQ99698 AC008687.5-201ENST00000593746 558 ntBASIC12.06□□□□□ -0.48
LYSTQ99698 AC027307.3-201ENST00000594262 1100 ntBASIC12.06□□□□□ -0.48
LYSTQ99698 AC008667.4-201ENST00000607370 168 ntBASIC12.06□□□□□ -0.48
LYSTQ99698 USP49-202ENST00000373010 2446 ntTSL 5 BASIC12.06□□□□□ -0.48
LYSTQ99698 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LYSTQ99698 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.06□□□□□ -0.48
LYSTQ99698 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LYSTQ99698 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LYSTQ99698 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
LYSTQ99698 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LYSTQ99698 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.06□□□□□ -0.48
LYSTQ99698 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LYSTQ99698 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.06□□□□□ -0.48
LYSTQ99698 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.06□□□□□ -0.48
LYSTQ99698 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LYSTQ99698 AC092919.2-201ENST00000623631 1645 ntBASIC12.06□□□□□ -0.48
LYSTQ99698 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC12.06□□□□□ -0.48
LYSTQ99698 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LYSTQ99698 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LYSTQ99698 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC12.06□□□□□ -0.48
LYSTQ99698 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms