Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHOX2BQ99453 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.77■□□□□ 0.44
PHOX2BQ99453 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHOX2BQ99453 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.77■□□□□ 0.44
PHOX2BQ99453 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PHOX2BQ99453 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.77■□□□□ 0.44
PHOX2BQ99453 CRB3P1-201ENST00000449338 276 ntBASIC17.77■□□□□ 0.44
PHOX2BQ99453 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.77■□□□□ 0.44
PHOX2BQ99453 AC067863.1-201ENST00000494933 530 ntBASIC17.77■□□□□ 0.44
PHOX2BQ99453 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.77■□□□□ 0.44
PHOX2BQ99453 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.77■□□□□ 0.44
PHOX2BQ99453 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.77■□□□□ 0.44
PHOX2BQ99453 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.77■□□□□ 0.44
PHOX2BQ99453 AC010507.1-201ENST00000633895 436 ntBASIC17.77■□□□□ 0.44
PHOX2BQ99453 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHOX2BQ99453 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.77■□□□□ 0.44
PHOX2BQ99453 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHOX2BQ99453 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PHOX2BQ99453 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
PHOX2BQ99453 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PHOX2BQ99453 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PHOX2BQ99453 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PHOX2BQ99453 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PHOX2BQ99453 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PHOX2BQ99453 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
PHOX2BQ99453 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PHOX2BQ99453 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHOX2BQ99453 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHOX2BQ99453 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PHOX2BQ99453 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.76■□□□□ 0.43
PHOX2BQ99453 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHOX2BQ99453 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.76■□□□□ 0.43
PHOX2BQ99453 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHOX2BQ99453 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHOX2BQ99453 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PHOX2BQ99453 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.76■□□□□ 0.43
PHOX2BQ99453 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PHOX2BQ99453 FAM207CP-201ENST00000443486 507 ntBASIC17.76■□□□□ 0.43
PHOX2BQ99453 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC17.76■□□□□ 0.43
PHOX2BQ99453 AC113404.2-201ENST00000507884 177 ntBASIC17.76■□□□□ 0.43
PHOX2BQ99453 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PHOX2BQ99453 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHOX2BQ99453 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PHOX2BQ99453 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PHOX2BQ99453 LINC01126-201ENST00000623515 1646 ntBASIC17.76■□□□□ 0.43
PHOX2BQ99453 KRT8P32-201ENST00000512863 1461 ntBASIC17.75■□□□□ 0.43
PHOX2BQ99453 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 AL049812.1-201ENST00000432563 2267 ntBASIC17.75■□□□□ 0.43
PHOX2BQ99453 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 MIR943-201ENST00000401286 94 ntBASIC17.75■□□□□ 0.43
PHOX2BQ99453 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 AL596325.1-201ENST00000563991 1082 ntBASIC17.75■□□□□ 0.43
PHOX2BQ99453 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 AC025048.6-201ENST00000634326 1161 ntBASIC17.75■□□□□ 0.43
PHOX2BQ99453 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PHOX2BQ99453 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHOX2BQ99453 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.74■□□□□ 0.43
PHOX2BQ99453 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.74■□□□□ 0.43
PHOX2BQ99453 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PHOX2BQ99453 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms