Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TWNKQ96RR1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TWNKQ96RR1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TWNKQ96RR1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.66■□□□□ 0.58
TWNKQ96RR1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.65■□□□□ 0.58
TWNKQ96RR1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.65■□□□□ 0.58
TWNKQ96RR1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TWNKQ96RR1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TWNKQ96RR1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TWNKQ96RR1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.65■□□□□ 0.58
TWNKQ96RR1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TWNKQ96RR1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TWNKQ96RR1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TWNKQ96RR1 SPDYE21P-201ENST00000413323 827 ntBASIC18.65■□□□□ 0.58
TWNKQ96RR1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.65■□□□□ 0.58
TWNKQ96RR1 RBM17P3-201ENST00000417687 1192 ntBASIC18.65■□□□□ 0.58
TWNKQ96RR1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.65■□□□□ 0.58
TWNKQ96RR1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TWNKQ96RR1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TWNKQ96RR1 SART3-203ENST00000546611 1184 ntBASIC18.65■□□□□ 0.58
TWNKQ96RR1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.65■□□□□ 0.58
TWNKQ96RR1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TWNKQ96RR1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.65■□□□□ 0.58
TWNKQ96RR1 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.65■□□□□ 0.58
TWNKQ96RR1 AL139327.4-201ENST00000612362 153 ntBASIC18.65■□□□□ 0.58
TWNKQ96RR1 AL031008.1-201ENST00000619963 541 ntBASIC18.65■□□□□ 0.58
TWNKQ96RR1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TWNKQ96RR1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TWNKQ96RR1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.65■□□□□ 0.58
TWNKQ96RR1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TWNKQ96RR1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.65■□□□□ 0.58
TWNKQ96RR1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TWNKQ96RR1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TWNKQ96RR1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TWNKQ96RR1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TWNKQ96RR1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.65■□□□□ 0.58
TWNKQ96RR1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.65■□□□□ 0.58
TWNKQ96RR1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TWNKQ96RR1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
TWNKQ96RR1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TWNKQ96RR1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.64■□□□□ 0.57
TWNKQ96RR1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TWNKQ96RR1 AC079776.2-201ENST00000641154 1609 ntBASIC18.64■□□□□ 0.57
TWNKQ96RR1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TWNKQ96RR1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TWNKQ96RR1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TWNKQ96RR1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.64■□□□□ 0.57
TWNKQ96RR1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TWNKQ96RR1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TWNKQ96RR1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.64■□□□□ 0.57
TWNKQ96RR1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.64■□□□□ 0.57
TWNKQ96RR1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.64■□□□□ 0.57
TWNKQ96RR1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.64■□□□□ 0.57
TWNKQ96RR1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TWNKQ96RR1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.64■□□□□ 0.57
TWNKQ96RR1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.64■□□□□ 0.57
TWNKQ96RR1 AC104692.2-201ENST00000603054 253 ntBASIC18.64■□□□□ 0.57
TWNKQ96RR1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TWNKQ96RR1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TWNKQ96RR1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
TWNKQ96RR1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TWNKQ96RR1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TWNKQ96RR1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
TWNKQ96RR1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.64■□□□□ 0.57
TWNKQ96RR1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TWNKQ96RR1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TWNKQ96RR1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.63■□□□□ 0.57
TWNKQ96RR1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TWNKQ96RR1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TWNKQ96RR1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TWNKQ96RR1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TWNKQ96RR1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TWNKQ96RR1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.63■□□□□ 0.57
TWNKQ96RR1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TWNKQ96RR1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TWNKQ96RR1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TWNKQ96RR1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TWNKQ96RR1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TWNKQ96RR1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TWNKQ96RR1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.63■□□□□ 0.57
TWNKQ96RR1 KLF4P1-201ENST00000412782 1185 ntBASIC18.63■□□□□ 0.57
TWNKQ96RR1 BX005266.1-201ENST00000473402 457 ntBASIC18.63■□□□□ 0.57
TWNKQ96RR1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TWNKQ96RR1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.63■□□□□ 0.57
TWNKQ96RR1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
TWNKQ96RR1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.63■□□□□ 0.57
TWNKQ96RR1 NKAPP1-205ENST00000585790 367 ntBASIC18.63■□□□□ 0.57
TWNKQ96RR1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TWNKQ96RR1 AL121912.1-201ENST00000603683 238 ntBASIC18.63■□□□□ 0.57
TWNKQ96RR1 AC073592.4-201ENST00000623827 446 ntBASIC18.63■□□□□ 0.57
TWNKQ96RR1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TWNKQ96RR1 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.63■□□□□ 0.57
TWNKQ96RR1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TWNKQ96RR1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.63■□□□□ 0.57
TWNKQ96RR1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.63■□□□□ 0.57
TWNKQ96RR1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.62■□□□□ 0.57
TWNKQ96RR1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TWNKQ96RR1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms