Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 AP006288.1-201ENST00000446065 395 ntBASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 KRT18P2-201ENST00000447938 1258 ntBASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 AC006504.4-201ENST00000592118 1568 ntBASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.96■□□□□ 0.79
SYNGAP1Q96PV0 AC148477.5-201ENST00000625164 1645 ntBASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 AC002310.6-201ENST00000624451 1377 ntBASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 AC003669.1-201ENST00000334569 611 ntBASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 KLF4P1-201ENST00000412782 1185 ntBASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNGAP1Q96PV0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 BICD1-207ENST00000551848 1962 ntBASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 DNAJB3-202ENST00000449667 1266 ntBASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNGAP1Q96PV0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 CRYGEP-201ENST00000412192 528 ntBASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 AC211486.1-202ENST00000416371 468 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms