Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 AC138028.4-201ENST00000564984 1845 ntBASIC14.32□□□□□ -0.12
ZNF48Q96MX3 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.32□□□□□ -0.12
ZNF48Q96MX3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 MIR1233-2-201ENST00000408138 82 ntBASIC14.32□□□□□ -0.12
ZNF48Q96MX3 MIR1233-1-201ENST00000408722 82 ntBASIC14.32□□□□□ -0.12
ZNF48Q96MX3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 BX005266.1-201ENST00000473402 457 ntBASIC14.32□□□□□ -0.12
ZNF48Q96MX3 RNA5SP415-201ENST00000517246 115 ntBASIC14.32□□□□□ -0.12
ZNF48Q96MX3 PGAM5P1-201ENST00000518923 814 ntBASIC14.32□□□□□ -0.12
ZNF48Q96MX3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 AC140113.2-201ENST00000604370 208 ntBASIC14.32□□□□□ -0.12
ZNF48Q96MX3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 AC008735.5-201ENST00000623544 497 ntBASIC14.32□□□□□ -0.12
ZNF48Q96MX3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 AC107918.4-202ENST00000641623 219 ntBASIC14.32□□□□□ -0.12
ZNF48Q96MX3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 KRT8P47-201ENST00000604727 1398 ntBASIC14.32□□□□□ -0.12
ZNF48Q96MX3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 AC007613.1-201ENST00000572811 2597 ntBASIC14.31□□□□□ -0.12
ZNF48Q96MX3 AP002414.3-201ENST00000589352 1468 ntBASIC14.31□□□□□ -0.12
ZNF48Q96MX3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 AC010460.3-201ENST00000511359 1579 ntBASIC14.31□□□□□ -0.12
ZNF48Q96MX3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 AC008764.6-201ENST00000595909 2069 ntBASIC14.31□□□□□ -0.12
ZNF48Q96MX3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 AL356488.2-201ENST00000602755 427 ntBASIC14.31□□□□□ -0.12
ZNF48Q96MX3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF48Q96MX3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.3□□□□□ -0.12
ZNF48Q96MX3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF48Q96MX3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF48Q96MX3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms