Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITCHQ96J02 KRT18P22-201ENST00000402024 1347 ntBASIC16.8■□□□□ 0.28
ITCHQ96J02 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.8■□□□□ 0.28
ITCHQ96J02 UBALD1-205ENST00000590891 2641 ntBASIC16.8■□□□□ 0.28
ITCHQ96J02 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITCHQ96J02 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITCHQ96J02 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITCHQ96J02 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITCHQ96J02 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ITCHQ96J02 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.8■□□□□ 0.28
ITCHQ96J02 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.8■□□□□ 0.28
ITCHQ96J02 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITCHQ96J02 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.8■□□□□ 0.28
ITCHQ96J02 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ITCHQ96J02 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.8■□□□□ 0.28
ITCHQ96J02 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITCHQ96J02 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITCHQ96J02 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITCHQ96J02 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITCHQ96J02 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ITCHQ96J02 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ITCHQ96J02 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITCHQ96J02 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ITCHQ96J02 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ITCHQ96J02 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.79■□□□□ 0.28
ITCHQ96J02 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
ITCHQ96J02 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ITCHQ96J02 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.79■□□□□ 0.28
ITCHQ96J02 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 TSPY12P-201ENST00000421279 868 ntBASIC16.79■□□□□ 0.28
ITCHQ96J02 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 RASA4DP-201ENST00000460726 1199 ntBASIC16.79■□□□□ 0.28
ITCHQ96J02 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.79■□□□□ 0.28
ITCHQ96J02 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.79■□□□□ 0.28
ITCHQ96J02 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.79■□□□□ 0.28
ITCHQ96J02 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.79■□□□□ 0.28
ITCHQ96J02 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.79■□□□□ 0.28
ITCHQ96J02 AL136038.4-201ENST00000603606 1261 ntBASIC16.79■□□□□ 0.28
ITCHQ96J02 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ITCHQ96J02 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.79■□□□□ 0.28
ITCHQ96J02 AL391807.1-203ENST00000604392 2365 ntBASIC16.79■□□□□ 0.28
ITCHQ96J02 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ITCHQ96J02 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ITCHQ96J02 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ITCHQ96J02 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.78■□□□□ 0.28
ITCHQ96J02 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
ITCHQ96J02 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ITCHQ96J02 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.78■□□□□ 0.28
ITCHQ96J02 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ITCHQ96J02 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ITCHQ96J02 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ITCHQ96J02 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.78■□□□□ 0.28
ITCHQ96J02 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.78■□□□□ 0.28
ITCHQ96J02 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ITCHQ96J02 KRT18P48-201ENST00000434763 852 ntBASIC16.78■□□□□ 0.28
ITCHQ96J02 AC112698.1-201ENST00000510299 916 ntBASIC16.78■□□□□ 0.28
ITCHQ96J02 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.78■□□□□ 0.28
ITCHQ96J02 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.78■□□□□ 0.28
ITCHQ96J02 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
ITCHQ96J02 AC140113.3-201ENST00000605663 199 ntBASIC16.78■□□□□ 0.28
ITCHQ96J02 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.78■□□□□ 0.28
ITCHQ96J02 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.78■□□□□ 0.28
ITCHQ96J02 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ITCHQ96J02 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ITCHQ96J02 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms