Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 AP000523.1-201ENST00000398242 1049 ntBASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 AL596275.1-201ENST00000423464 877 ntBASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 AGGF1P2-201ENST00000426656 2106 ntBASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 LINC01568-207ENST00000641790 1380 ntBASIC16.63■□□□□ 0.25
SLC47A1Q96FL8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 SEC1P-202ENST00000473944 940 ntBASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 AC024243.1-201ENST00000609234 778 ntBASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 KRT18P22-201ENST00000402024 1347 ntBASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 PCDHB19P-201ENST00000570871 2371 ntBASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC47A1Q96FL8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 AC105020.1-201ENST00000435356 2205 ntBASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 PCDHA14-201ENST00000506751 2298 ntBASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 AL356309.3-201ENST00000624132 1934 ntBASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 AC008687.5-201ENST00000593746 558 ntBASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 AC092865.7-201ENST00000641832 219 ntBASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SLC47A1Q96FL8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms