Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX11Q96FC9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.93■□□□□ 0.94
DDX11Q96FC9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX11Q96FC9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX11Q96FC9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX11Q96FC9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
DDX11Q96FC9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
DDX11Q96FC9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX11Q96FC9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX11Q96FC9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX11Q96FC9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.93■□□□□ 0.94
DDX11Q96FC9 NUS1P2-201ENST00000417358 873 ntBASIC20.93■□□□□ 0.94
DDX11Q96FC9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX11Q96FC9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX11Q96FC9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX11Q96FC9 AP005901.3-202ENST00000581653 237 ntBASIC20.93■□□□□ 0.94
DDX11Q96FC9 AL121912.1-201ENST00000603683 238 ntBASIC20.93■□□□□ 0.94
DDX11Q96FC9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX11Q96FC9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
DDX11Q96FC9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX11Q96FC9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.93■□□□□ 0.94
DDX11Q96FC9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX11Q96FC9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
DDX11Q96FC9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX11Q96FC9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX11Q96FC9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.93■□□□□ 0.94
DDX11Q96FC9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX11Q96FC9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX11Q96FC9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.92■□□□□ 0.94
DDX11Q96FC9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX11Q96FC9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.92■□□□□ 0.94
DDX11Q96FC9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.92■□□□□ 0.94
DDX11Q96FC9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
DDX11Q96FC9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX11Q96FC9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX11Q96FC9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.92■□□□□ 0.94
DDX11Q96FC9 AP000347.1-202ENST00000435868 847 ntBASIC20.92■□□□□ 0.94
DDX11Q96FC9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX11Q96FC9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.92■□□□□ 0.94
DDX11Q96FC9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
DDX11Q96FC9 AC091607.1-201ENST00000490318 1060 ntBASIC20.92■□□□□ 0.94
DDX11Q96FC9 AC113404.2-201ENST00000507884 177 ntBASIC20.92■□□□□ 0.94
DDX11Q96FC9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
DDX11Q96FC9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX11Q96FC9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.92■□□□□ 0.94
DDX11Q96FC9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.92■□□□□ 0.94
DDX11Q96FC9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.92■□□□□ 0.94
DDX11Q96FC9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX11Q96FC9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX11Q96FC9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
DDX11Q96FC9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.92■□□□□ 0.94
DDX11Q96FC9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX11Q96FC9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX11Q96FC9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
DDX11Q96FC9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX11Q96FC9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.92■□□□□ 0.94
DDX11Q96FC9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX11Q96FC9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX11Q96FC9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX11Q96FC9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
DDX11Q96FC9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DDX11Q96FC9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX11Q96FC9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DDX11Q96FC9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX11Q96FC9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.91■□□□□ 0.94
DDX11Q96FC9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
DDX11Q96FC9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
DDX11Q96FC9 AC079776.4-201ENST00000511039 504 ntBASIC20.91■□□□□ 0.94
DDX11Q96FC9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DDX11Q96FC9 AP002469.2-201ENST00000531724 424 ntBASIC20.91■□□□□ 0.94
DDX11Q96FC9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.91■□□□□ 0.94
DDX11Q96FC9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.91■□□□□ 0.94
DDX11Q96FC9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DDX11Q96FC9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.91■□□□□ 0.94
DDX11Q96FC9 AC012313.1-201ENST00000593393 3059 ntBASIC20.91■□□□□ 0.94
DDX11Q96FC9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.91■□□□□ 0.94
DDX11Q96FC9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX11Q96FC9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.91■□□□□ 0.94
DDX11Q96FC9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX11Q96FC9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
DDX11Q96FC9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.9■□□□□ 0.94
DDX11Q96FC9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
DDX11Q96FC9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
DDX11Q96FC9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.9■□□□□ 0.94
DDX11Q96FC9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
DDX11Q96FC9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
DDX11Q96FC9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
DDX11Q96FC9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
DDX11Q96FC9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
DDX11Q96FC9 AC022898.2-201ENST00000616822 1312 ntBASIC20.9■□□□□ 0.94
DDX11Q96FC9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX11Q96FC9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
DDX11Q96FC9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDX11Q96FC9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.9■□□□□ 0.94
DDX11Q96FC9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.9■□□□□ 0.94
DDX11Q96FC9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
DDX11Q96FC9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.9■□□□□ 0.94
DDX11Q96FC9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.9■□□□□ 0.94
DDX11Q96FC9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX11Q96FC9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms