Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM9SF4Q92544 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM9SF4Q92544 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TM9SF4Q92544 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TM9SF4Q92544 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 AL031284.1-201ENST00000419297 478 ntBASIC16.65■□□□□ 0.26
TM9SF4Q92544 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TM9SF4Q92544 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TM9SF4Q92544 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TM9SF4Q92544 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TM9SF4Q92544 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.65■□□□□ 0.26
TM9SF4Q92544 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.64■□□□□ 0.26
TM9SF4Q92544 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.64■□□□□ 0.26
TM9SF4Q92544 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TM9SF4Q92544 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.64■□□□□ 0.25
TM9SF4Q92544 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM9SF4Q92544 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TM9SF4Q92544 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM9SF4Q92544 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM9SF4Q92544 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.64■□□□□ 0.25
TM9SF4Q92544 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM9SF4Q92544 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.64■□□□□ 0.25
TM9SF4Q92544 AC138028.4-201ENST00000564984 1845 ntBASIC16.64■□□□□ 0.25
TM9SF4Q92544 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.64■□□□□ 0.25
TM9SF4Q92544 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM9SF4Q92544 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM9SF4Q92544 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM9SF4Q92544 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.64■□□□□ 0.25
TM9SF4Q92544 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TM9SF4Q92544 AC132008.2-207ENST00000454517 770 ntBASIC16.64■□□□□ 0.25
TM9SF4Q92544 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.64■□□□□ 0.25
TM9SF4Q92544 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.64■□□□□ 0.25
TM9SF4Q92544 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TM9SF4Q92544 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
TM9SF4Q92544 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
TM9SF4Q92544 TP73-AS1-207ENST00000624167 988 ntBASIC16.64■□□□□ 0.25
TM9SF4Q92544 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM9SF4Q92544 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.64■□□□□ 0.25
TM9SF4Q92544 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.64■□□□□ 0.25
TM9SF4Q92544 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.64■□□□□ 0.25
TM9SF4Q92544 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM9SF4Q92544 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM9SF4Q92544 IL9RP2-201ENST00000423948 1312 ntBASIC16.64■□□□□ 0.25
TM9SF4Q92544 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM9SF4Q92544 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TM9SF4Q92544 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM9SF4Q92544 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TM9SF4Q92544 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
TM9SF4Q92544 MYLKP1-201ENST00000509077 1580 ntBASIC16.64■□□□□ 0.25
TM9SF4Q92544 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.64■□□□□ 0.25
TM9SF4Q92544 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM9SF4Q92544 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TM9SF4Q92544 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TM9SF4Q92544 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TM9SF4Q92544 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM9SF4Q92544 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM9SF4Q92544 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TM9SF4Q92544 TP73-AS1-210ENST00000637775 1455 ntBASIC16.63■□□□□ 0.25
TM9SF4Q92544 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.63■□□□□ 0.25
TM9SF4Q92544 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM9SF4Q92544 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TM9SF4Q92544 SLC25A6P5-201ENST00000435663 894 ntBASIC16.63■□□□□ 0.25
TM9SF4Q92544 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.63■□□□□ 0.25
TM9SF4Q92544 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.63■□□□□ 0.25
TM9SF4Q92544 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.63■□□□□ 0.25
TM9SF4Q92544 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.63■□□□□ 0.25
TM9SF4Q92544 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.63■□□□□ 0.25
TM9SF4Q92544 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM9SF4Q92544 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TM9SF4Q92544 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM9SF4Q92544 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM9SF4Q92544 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM9SF4Q92544 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.63■□□□□ 0.25
TM9SF4Q92544 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM9SF4Q92544 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TM9SF4Q92544 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF4Q92544 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF4Q92544 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF4Q92544 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF4Q92544 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF4Q92544 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms