Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CKAP2Q8WWK9 AC007950.2-201ENST00000615045 2347 ntBASIC17.52■□□□□ 0.39
CKAP2Q8WWK9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 SLC25A1P3-201ENST00000395415 828 ntBASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.51■□□□□ 0.39
CKAP2Q8WWK9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 AL513523.2-202ENST00000427283 2040 ntBASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CKAP2Q8WWK9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 ABHD17AP1-201ENST00000358206 933 ntBASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 AL355355.2-201ENST00000442321 338 ntBASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 AC097488.1-201ENST00000507834 756 ntBASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.49■□□□□ 0.39
CKAP2Q8WWK9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms