Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF139Q8WU17 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF139Q8WU17 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF139Q8WU17 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF139Q8WU17 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF139Q8WU17 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF139Q8WU17 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF139Q8WU17 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF139Q8WU17 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF139Q8WU17 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF139Q8WU17 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 BX276092.7-203ENST00000637198 1536 ntBASIC18.51■□□□□ 0.55
RNF139Q8WU17 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF139Q8WU17 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 COX5BP2-201ENST00000392354 334 ntBASIC18.51■□□□□ 0.55
RNF139Q8WU17 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF139Q8WU17 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 AC005332.8-201ENST00000622750 2735 ntBASIC18.51■□□□□ 0.55
RNF139Q8WU17 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF139Q8WU17 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF139Q8WU17 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF139Q8WU17 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF139Q8WU17 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF139Q8WU17 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF139Q8WU17 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
RNF139Q8WU17 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 AC122714.2-201ENST00000502787 707 ntBASIC18.5■□□□□ 0.55
RNF139Q8WU17 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF139Q8WU17 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF139Q8WU17 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF139Q8WU17 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF139Q8WU17 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF139Q8WU17 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RNF139Q8WU17 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF139Q8WU17 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF139Q8WU17 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.49■□□□□ 0.55
RNF139Q8WU17 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF139Q8WU17 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF139Q8WU17 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF139Q8WU17 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF139Q8WU17 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF139Q8WU17 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF139Q8WU17 FAAHP1-202ENST00000446499 1238 ntBASIC18.49■□□□□ 0.55
RNF139Q8WU17 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF139Q8WU17 EMBP1-201ENST00000458200 901 ntBASIC18.49■□□□□ 0.55
RNF139Q8WU17 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.49■□□□□ 0.55
RNF139Q8WU17 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.49■□□□□ 0.55
RNF139Q8WU17 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.49■□□□□ 0.55
RNF139Q8WU17 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF139Q8WU17 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF139Q8WU17 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RNF139Q8WU17 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF139Q8WU17 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF139Q8WU17 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms