Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 AC069120.2-201ENST00000524091 540 ntBASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC11.73□□□□□ -0.53
ALMS1Q8TCU4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 AL671277.1-201ENST00000429656 993 ntBASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 AC140658.5-201ENST00000438532 169 ntBASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 API5-211ENST00000534695 560 ntTSL 5 BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 AC022144.1-201ENST00000602255 1580 ntBASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 TP53TG3HP-202ENST00000569755 579 ntBASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC11.72□□□□□ -0.53
ALMS1Q8TCU4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 CU639417.3-201ENST00000624240 1404 ntBASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 AC140912.1-201ENST00000577171 1054 ntBASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ALMS1Q8TCU4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 PGF-202ENST00000405431 666 ntTSL 5 BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ALMS1Q8TCU4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.71□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms