Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC26.29■■□□□ 1.8
CCER1Q8TC90 KRT18P48-201ENST00000434763 852 ntBASIC26.29■■□□□ 1.8
CCER1Q8TC90 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC26.29■■□□□ 1.8
CCER1Q8TC90 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCER1Q8TC90 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC26.29■■□□□ 1.8
CCER1Q8TC90 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCER1Q8TC90 AC106886.4-201ENST00000623557 2502 ntBASIC26.29■■□□□ 1.8
CCER1Q8TC90 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CCER1Q8TC90 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCER1Q8TC90 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCER1Q8TC90 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CCER1Q8TC90 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC26.28■■□□□ 1.8
CCER1Q8TC90 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCER1Q8TC90 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC26.28■■□□□ 1.8
CCER1Q8TC90 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCER1Q8TC90 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC26.28■■□□□ 1.8
CCER1Q8TC90 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC26.28■■□□□ 1.8
CCER1Q8TC90 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCER1Q8TC90 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC26.28■■□□□ 1.8
CCER1Q8TC90 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC26.28■■□□□ 1.8
CCER1Q8TC90 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC26.28■■□□□ 1.8
CCER1Q8TC90 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCER1Q8TC90 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCER1Q8TC90 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CCER1Q8TC90 AC092597.1-201ENST00000487352 616 ntBASIC26.28■■□□□ 1.8
CCER1Q8TC90 AC093827.2-201ENST00000512654 315 ntBASIC26.28■■□□□ 1.8
CCER1Q8TC90 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCER1Q8TC90 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCER1Q8TC90 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCER1Q8TC90 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCER1Q8TC90 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCER1Q8TC90 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCER1Q8TC90 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCER1Q8TC90 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCER1Q8TC90 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCER1Q8TC90 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC26.27■■□□□ 1.8
CCER1Q8TC90 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCER1Q8TC90 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CCER1Q8TC90 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC26.27■■□□□ 1.8
CCER1Q8TC90 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCER1Q8TC90 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CCER1Q8TC90 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCER1Q8TC90 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCER1Q8TC90 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCER1Q8TC90 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC26.27■■□□□ 1.8
CCER1Q8TC90 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC26.27■■□□□ 1.8
CCER1Q8TC90 HLA-F-220ENST00000434407 884 ntBASIC26.27■■□□□ 1.8
CCER1Q8TC90 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC26.27■■□□□ 1.8
CCER1Q8TC90 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC26.27■■□□□ 1.8
CCER1Q8TC90 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC26.27■■□□□ 1.8
CCER1Q8TC90 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC26.27■■□□□ 1.8
CCER1Q8TC90 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCER1Q8TC90 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCER1Q8TC90 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCER1Q8TC90 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCER1Q8TC90 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCER1Q8TC90 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
CCER1Q8TC90 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCER1Q8TC90 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCER1Q8TC90 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC26.27■■□□□ 1.8
CCER1Q8TC90 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCER1Q8TC90 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCER1Q8TC90 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC26.26■■□□□ 1.79
CCER1Q8TC90 AC060834.1-201ENST00000443027 2032 ntBASIC26.26■■□□□ 1.79
CCER1Q8TC90 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCER1Q8TC90 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCER1Q8TC90 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCER1Q8TC90 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCER1Q8TC90 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCER1Q8TC90 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCER1Q8TC90 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCER1Q8TC90 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC26.26■■□□□ 1.79
CCER1Q8TC90 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCER1Q8TC90 ANKRD20A18P-201ENST00000359341 492 ntBASIC26.26■■□□□ 1.79
CCER1Q8TC90 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCER1Q8TC90 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCER1Q8TC90 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC26.26■■□□□ 1.79
CCER1Q8TC90 COX11P1-201ENST00000489116 835 ntBASIC26.26■■□□□ 1.79
CCER1Q8TC90 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCER1Q8TC90 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC26.26■■□□□ 1.79
CCER1Q8TC90 AC011558.1-201ENST00000623459 338 ntBASIC26.26■■□□□ 1.79
CCER1Q8TC90 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCER1Q8TC90 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC26.26■■□□□ 1.79
CCER1Q8TC90 TNRC18P3-201ENST00000441896 2691 ntBASIC26.26■■□□□ 1.79
CCER1Q8TC90 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
CCER1Q8TC90 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCER1Q8TC90 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC26.26■■□□□ 1.79
CCER1Q8TC90 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCER1Q8TC90 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCER1Q8TC90 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCER1Q8TC90 BX276092.7-203ENST00000637198 1536 ntBASIC26.25■■□□□ 1.79
CCER1Q8TC90 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
CCER1Q8TC90 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCER1Q8TC90 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCER1Q8TC90 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCER1Q8TC90 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CCER1Q8TC90 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCER1Q8TC90 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCER1Q8TC90 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC26.25■■□□□ 1.79
CCER1Q8TC90 LIN28AP1-201ENST00000429574 405 ntBASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms