Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIMC1Q8NDZ2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 AP002414.4-201ENST00000589764 1148 ntBASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 AL353801.3-201ENST00000609898 542 ntBASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 AC093458.2-201ENST00000623150 629 ntBASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 KRT18P1-202ENST00000452408 1331 ntBASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.62■□□□□ 0.25
SIMC1Q8NDZ2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 TPSP2-201ENST00000561760 610 ntBASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.61■□□□□ 0.25
SIMC1Q8NDZ2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 AC010460.3-201ENST00000511359 1579 ntBASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SIMC1Q8NDZ2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms