Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 INTS4P1-201ENST00000438455 1935 ntBASIC19.94■□□□□ 0.78
RETREG2Q8NC44 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETREG2Q8NC44 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETREG2Q8NC44 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 AC092183.1-201ENST00000469884 875 ntBASIC19.92■□□□□ 0.78
RETREG2Q8NC44 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 AC112698.1-201ENST00000510299 916 ntBASIC19.92■□□□□ 0.78
RETREG2Q8NC44 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 AP005117.1-201ENST00000584346 1413 ntBASIC19.92■□□□□ 0.78
RETREG2Q8NC44 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETREG2Q8NC44 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RETREG2Q8NC44 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms