Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
TRAM1L1Q8N609 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRAM1L1Q8N609 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
TRAM1L1Q8N609 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 AL356309.3-201ENST00000624132 1934 ntBASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 AL020989.1-201ENST00000422979 469 ntBASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 AC079781.3-201ENST00000449110 356 ntBASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAM1L1Q8N609 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 AC090340.1-201ENST00000620778 4980 ntBASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 AC009336.1-201ENST00000608941 1553 ntBASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 AL031008.1-201ENST00000619963 541 ntBASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAM1L1Q8N609 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 AC067852.2-201ENST00000590513 2313 ntBASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 NKAPP1-205ENST00000585790 367 ntBASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 AL121894.2-201ENST00000602977 491 ntBASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAM1L1Q8N609 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms