Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 AC096582.2-201ENST00000510860 516 ntBASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 BNIP3P18-201ENST00000593976 575 ntBASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 AL591684.3-201ENST00000605187 298 ntBASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 AC023511.2-201ENST00000618803 211 ntBASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC33Q8N5R6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 MIR5100-201ENST00000579544 119 ntBASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC33Q8N5R6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 POM121L3P-201ENST00000419331 1163 ntBASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC33Q8N5R6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 FAM197Y8-203ENST00000450145 560 ntBASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC33Q8N5R6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms