Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 AC099343.3-201ENST00000605834 2503 ntBASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEPDC4Q8N2C3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 DUX4L26-201ENST00000489078 1255 ntBASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 COX11P1-201ENST00000489116 835 ntBASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 AC009065.1-201ENST00000564055 1225 ntBASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEPDC4Q8N2C3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 AC092647.4-201ENST00000457211 535 ntBASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 MIR3180-5-201ENST00000583743 153 ntBASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 AC141257.4-201ENST00000634557 245 ntBASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 AC136944.6-201ENST00000634818 245 ntBASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 AC036111.1-201ENST00000533973 1582 ntBASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 LINC01126-201ENST00000623515 1646 ntBASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DEPDC4Q8N2C3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms