Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 AC008677.1-201ENST00000519230 1561 ntBASIC25.8■■□□□ 1.72
ABCA6Q8N139 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ABCA6Q8N139 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC25.8■■□□□ 1.72
ABCA6Q8N139 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
ABCA6Q8N139 AC129492.6-201ENST00000611383 1305 ntBASIC25.8■■□□□ 1.72
ABCA6Q8N139 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC25.8■■□□□ 1.72
ABCA6Q8N139 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ABCA6Q8N139 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC25.8■■□□□ 1.72
ABCA6Q8N139 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ABCA6Q8N139 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
ABCA6Q8N139 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ABCA6Q8N139 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ABCA6Q8N139 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ABCA6Q8N139 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ABCA6Q8N139 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
ABCA6Q8N139 EDF1-203ENST00000371649 790 ntTSL 2 BASIC25.79■■□□□ 1.72
ABCA6Q8N139 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC25.79■■□□□ 1.72
ABCA6Q8N139 RBPMS2P1-201ENST00000437762 623 ntBASIC25.79■■□□□ 1.72
ABCA6Q8N139 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC25.79■■□□□ 1.72
ABCA6Q8N139 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ABCA6Q8N139 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC25.79■■□□□ 1.72
ABCA6Q8N139 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC25.78■■□□□ 1.72
ABCA6Q8N139 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC25.78■■□□□ 1.72
ABCA6Q8N139 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ABCA6Q8N139 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
ABCA6Q8N139 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC25.78■■□□□ 1.72
ABCA6Q8N139 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC25.78■■□□□ 1.72
ABCA6Q8N139 AL645728.2-201ENST00000641974 660 ntBASIC25.78■■□□□ 1.72
ABCA6Q8N139 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ABCA6Q8N139 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC25.78■■□□□ 1.72
ABCA6Q8N139 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC25.78■■□□□ 1.72
ABCA6Q8N139 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ABCA6Q8N139 TDG-209ENST00000544861 1387 ntTSL 2 BASIC25.78■■□□□ 1.72
ABCA6Q8N139 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
ABCA6Q8N139 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC25.78■■□□□ 1.72
ABCA6Q8N139 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC25.78■■□□□ 1.72
ABCA6Q8N139 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ABCA6Q8N139 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ABCA6Q8N139 GNAS-203ENST00000306120 1878 ntBASIC25.78■■□□□ 1.72
ABCA6Q8N139 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC25.78■■□□□ 1.72
ABCA6Q8N139 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ABCA6Q8N139 COX5BP8-201ENST00000416911 349 ntBASIC25.77■■□□□ 1.72
ABCA6Q8N139 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC25.77■■□□□ 1.72
ABCA6Q8N139 AL671277.1-201ENST00000429656 993 ntBASIC25.77■■□□□ 1.72
ABCA6Q8N139 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC25.77■■□□□ 1.72
ABCA6Q8N139 AC026150.2-201ENST00000564693 1156 ntBASIC25.77■■□□□ 1.72
ABCA6Q8N139 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ABCA6Q8N139 COQ9-214ENST00000567933 882 ntTSL 3 BASIC25.77■■□□□ 1.72
ABCA6Q8N139 COX11-202ENST00000571584 1108 ntTSL 2 BASIC25.77■■□□□ 1.72
ABCA6Q8N139 AC084121.4-201ENST00000641598 221 ntBASIC25.77■■□□□ 1.72
ABCA6Q8N139 AF228730.8-201ENST00000642140 221 ntBASIC25.77■■□□□ 1.72
ABCA6Q8N139 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC25.77■■□□□ 1.72
ABCA6Q8N139 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
ABCA6Q8N139 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ABCA6Q8N139 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
ABCA6Q8N139 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ABCA6Q8N139 AL135999.2-201ENST00000622438 1686 ntBASIC25.77■■□□□ 1.72
ABCA6Q8N139 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC25.77■■□□□ 1.72
ABCA6Q8N139 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
ABCA6Q8N139 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
ABCA6Q8N139 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
ABCA6Q8N139 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
ABCA6Q8N139 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ABCA6Q8N139 OR8S1-201ENST00000310194 1080 ntBASIC25.77■■□□□ 1.72
ABCA6Q8N139 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ABCA6Q8N139 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ABCA6Q8N139 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC25.77■■□□□ 1.72
ABCA6Q8N139 GOLGA6L11P-201ENST00000417252 1298 ntBASIC25.77■■□□□ 1.72
ABCA6Q8N139 HNRNPA1P40-201ENST00000426371 1278 ntBASIC25.77■■□□□ 1.72
ABCA6Q8N139 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
ABCA6Q8N139 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC25.77■■□□□ 1.72
ABCA6Q8N139 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
ABCA6Q8N139 AC116407.2-201ENST00000613639 860 ntBASIC25.77■■□□□ 1.72
ABCA6Q8N139 MIR6080-201ENST00000617359 66 ntBASIC25.77■■□□□ 1.72
ABCA6Q8N139 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
ABCA6Q8N139 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC25.77■■□□□ 1.72
ABCA6Q8N139 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
ABCA6Q8N139 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC25.77■■□□□ 1.72
ABCA6Q8N139 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
ABCA6Q8N139 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
ABCA6Q8N139 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC25.76■■□□□ 1.71
ABCA6Q8N139 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
ABCA6Q8N139 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
ABCA6Q8N139 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC25.76■■□□□ 1.71
ABCA6Q8N139 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
ABCA6Q8N139 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
ABCA6Q8N139 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC25.76■■□□□ 1.71
ABCA6Q8N139 MMP17-203ENST00000535004 719 ntTSL 3 BASIC25.76■■□□□ 1.71
ABCA6Q8N139 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
ABCA6Q8N139 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
ABCA6Q8N139 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC25.76■■□□□ 1.71
ABCA6Q8N139 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC25.76■■□□□ 1.71
ABCA6Q8N139 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC25.76■■□□□ 1.71
ABCA6Q8N139 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
ABCA6Q8N139 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
ABCA6Q8N139 POR-209ENST00000439269 1858 ntTSL 2 BASIC25.75■■□□□ 1.71
ABCA6Q8N139 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
ABCA6Q8N139 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ABCA6Q8N139 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ABCA6Q8N139 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms