Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC21.91■■□□□ 1.1
COL23A1Q86Y22 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL23A1Q86Y22 NME2P1-201ENST00000426182 414 ntBASIC21.91■■□□□ 1.1
COL23A1Q86Y22 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC21.91■■□□□ 1.1
COL23A1Q86Y22 AC097493.3-201ENST00000509725 367 ntBASIC21.91■■□□□ 1.1
COL23A1Q86Y22 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL23A1Q86Y22 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21.91■■□□□ 1.1
COL23A1Q86Y22 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.91■■□□□ 1.1
COL23A1Q86Y22 AC025048.6-201ENST00000634326 1161 ntBASIC21.91■■□□□ 1.1
COL23A1Q86Y22 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL23A1Q86Y22 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
COL23A1Q86Y22 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 SPDYE14P-201ENST00000442619 822 ntBASIC21.9■■□□□ 1.1
COL23A1Q86Y22 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 LINC01225-203ENST00000563550 1244 ntBASIC21.9■■□□□ 1.1
COL23A1Q86Y22 AL596325.1-201ENST00000563991 1082 ntBASIC21.9■■□□□ 1.1
COL23A1Q86Y22 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL23A1Q86Y22 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL23A1Q86Y22 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.89■■□□□ 1.1
COL23A1Q86Y22 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
COL23A1Q86Y22 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL23A1Q86Y22 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL23A1Q86Y22 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
COL23A1Q86Y22 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
COL23A1Q86Y22 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.89■■□□□ 1.1
COL23A1Q86Y22 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
COL23A1Q86Y22 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.89■■□□□ 1.1
COL23A1Q86Y22 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.89■■□□□ 1.1
COL23A1Q86Y22 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL23A1Q86Y22 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
COL23A1Q86Y22 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.89■■□□□ 1.09
COL23A1Q86Y22 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.89■■□□□ 1.09
COL23A1Q86Y22 AL512638.1-201ENST00000457493 794 ntBASIC21.89■■□□□ 1.09
COL23A1Q86Y22 SERBP1P5-201ENST00000510079 1181 ntBASIC21.89■■□□□ 1.09
COL23A1Q86Y22 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.89■■□□□ 1.09
COL23A1Q86Y22 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.89■■□□□ 1.09
COL23A1Q86Y22 SPDYE22P-201ENST00000582158 798 ntBASIC21.89■■□□□ 1.09
COL23A1Q86Y22 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
COL23A1Q86Y22 AL158211.3-201ENST00000607385 239 ntBASIC21.89■■□□□ 1.09
COL23A1Q86Y22 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL23A1Q86Y22 AC009949.1-201ENST00000623048 1830 ntBASIC21.89■■□□□ 1.09
COL23A1Q86Y22 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.89■■□□□ 1.09
COL23A1Q86Y22 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.89■■□□□ 1.09
COL23A1Q86Y22 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.89■■□□□ 1.09
COL23A1Q86Y22 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL23A1Q86Y22 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 RARRES2P8-201ENST00000566335 367 ntBASIC21.88■■□□□ 1.09
COL23A1Q86Y22 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 MIR6752-201ENST00000618442 71 ntBASIC21.88■■□□□ 1.09
COL23A1Q86Y22 AL358472.5-202ENST00000641448 1267 ntBASIC21.88■■□□□ 1.09
COL23A1Q86Y22 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.88■■□□□ 1.09
COL23A1Q86Y22 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
COL23A1Q86Y22 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.87■■□□□ 1.09
COL23A1Q86Y22 AKAP8P1-201ENST00000434743 1349 ntBASIC21.87■■□□□ 1.09
COL23A1Q86Y22 AC129492.6-201ENST00000611383 1305 ntBASIC21.87■■□□□ 1.09
COL23A1Q86Y22 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.87■■□□□ 1.09
COL23A1Q86Y22 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL23A1Q86Y22 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL23A1Q86Y22 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
COL23A1Q86Y22 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL23A1Q86Y22 AC087163.2-201ENST00000457299 853 ntBASIC21.87■■□□□ 1.09
COL23A1Q86Y22 AC022494.1-201ENST00000466044 728 ntBASIC21.87■■□□□ 1.09
COL23A1Q86Y22 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.87■■□□□ 1.09
COL23A1Q86Y22 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
COL23A1Q86Y22 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL23A1Q86Y22 AL662799.1-202ENST00000614205 422 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms