Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.71■□□□□ 0.11
LRRC28Q86X40 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.71■□□□□ 0.11
LRRC28Q86X40 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.71■□□□□ 0.11
LRRC28Q86X40 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.71■□□□□ 0.11
LRRC28Q86X40 AC063952.2-201ENST00000498792 1227 ntBASIC15.71■□□□□ 0.11
LRRC28Q86X40 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC28Q86X40 MIR3180-5-201ENST00000583743 153 ntBASIC15.71■□□□□ 0.11
LRRC28Q86X40 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.71■□□□□ 0.11
LRRC28Q86X40 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LRRC28Q86X40 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC28Q86X40 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC28Q86X40 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC28Q86X40 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LRRC28Q86X40 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LRRC28Q86X40 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
LRRC28Q86X40 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.71■□□□□ 0.1
LRRC28Q86X40 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LRRC28Q86X40 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LRRC28Q86X40 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRRC28Q86X40 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC28Q86X40 AL162727.3-201ENST00000635661 2787 ntBASIC15.7■□□□□ 0.1
LRRC28Q86X40 AC106886.4-201ENST00000623557 2502 ntBASIC15.7■□□□□ 0.1
LRRC28Q86X40 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.7■□□□□ 0.1
LRRC28Q86X40 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC28Q86X40 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC28Q86X40 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.7■□□□□ 0.1
LRRC28Q86X40 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC28Q86X40 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LRRC28Q86X40 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC28Q86X40 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC28Q86X40 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC28Q86X40 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.7■□□□□ 0.1
LRRC28Q86X40 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.7■□□□□ 0.1
LRRC28Q86X40 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.7■□□□□ 0.1
LRRC28Q86X40 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.7■□□□□ 0.1
LRRC28Q86X40 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC28Q86X40 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC28Q86X40 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
LRRC28Q86X40 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC28Q86X40 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC28Q86X40 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LRRC28Q86X40 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LRRC28Q86X40 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC28Q86X40 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
LRRC28Q86X40 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LRRC28Q86X40 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC28Q86X40 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC28Q86X40 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRRC28Q86X40 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LRRC28Q86X40 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.69■□□□□ 0.1
LRRC28Q86X40 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.69■□□□□ 0.1
LRRC28Q86X40 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LRRC28Q86X40 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LRRC28Q86X40 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LRRC28Q86X40 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LRRC28Q86X40 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.69■□□□□ 0.1
LRRC28Q86X40 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.69■□□□□ 0.1
LRRC28Q86X40 KRT18P35-201ENST00000510488 1269 ntBASIC15.69■□□□□ 0.1
LRRC28Q86X40 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRC28Q86X40 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 AL445228.2-201ENST00000605589 952 ntBASIC15.69■□□□□ 0.1
LRRC28Q86X40 AL023973.1-201ENST00000624619 620 ntBASIC15.69■□□□□ 0.1
LRRC28Q86X40 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRC28Q86X40 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRC28Q86X40 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.69■□□□□ 0.1
LRRC28Q86X40 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LRRC28Q86X40 PCDHA14-201ENST00000506751 2298 ntBASIC15.69■□□□□ 0.1
LRRC28Q86X40 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
LRRC28Q86X40 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRRC28Q86X40 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 AGGF1P2-201ENST00000426656 2106 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms