Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAPH1Q70E73 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAPH1Q70E73 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RAPH1Q70E73 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.74■□□□□ 0.43
RAPH1Q70E73 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAPH1Q70E73 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RAPH1Q70E73 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAPH1Q70E73 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RAPH1Q70E73 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAPH1Q70E73 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.73■□□□□ 0.43
RAPH1Q70E73 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.73■□□□□ 0.43
RAPH1Q70E73 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.73■□□□□ 0.43
RAPH1Q70E73 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAPH1Q70E73 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.73■□□□□ 0.43
RAPH1Q70E73 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAPH1Q70E73 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
RAPH1Q70E73 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RAPH1Q70E73 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAPH1Q70E73 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAPH1Q70E73 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
RAPH1Q70E73 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAPH1Q70E73 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAPH1Q70E73 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
RAPH1Q70E73 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAPH1Q70E73 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAPH1Q70E73 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAPH1Q70E73 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAPH1Q70E73 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAPH1Q70E73 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.73■□□□□ 0.43
RAPH1Q70E73 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RAPH1Q70E73 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
RAPH1Q70E73 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAPH1Q70E73 AC046158.3-201ENST00000624947 2558 ntBASIC17.73■□□□□ 0.43
RAPH1Q70E73 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAPH1Q70E73 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
RAPH1Q70E73 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAPH1Q70E73 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.72■□□□□ 0.43
RAPH1Q70E73 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.72■□□□□ 0.43
RAPH1Q70E73 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.72■□□□□ 0.43
RAPH1Q70E73 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAPH1Q70E73 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.72■□□□□ 0.43
RAPH1Q70E73 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAPH1Q70E73 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAPH1Q70E73 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.72■□□□□ 0.43
RAPH1Q70E73 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAPH1Q70E73 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAPH1Q70E73 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAPH1Q70E73 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAPH1Q70E73 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.72■□□□□ 0.43
RAPH1Q70E73 LIN28AP1-201ENST00000429574 405 ntBASIC17.72■□□□□ 0.43
RAPH1Q70E73 KRT18P65-201ENST00000439811 1286 ntBASIC17.72■□□□□ 0.43
RAPH1Q70E73 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.72■□□□□ 0.43
RAPH1Q70E73 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.72■□□□□ 0.43
RAPH1Q70E73 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.72■□□□□ 0.43
RAPH1Q70E73 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.72■□□□□ 0.43
RAPH1Q70E73 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.72■□□□□ 0.43
RAPH1Q70E73 AL023973.1-201ENST00000624619 620 ntBASIC17.72■□□□□ 0.43
RAPH1Q70E73 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAPH1Q70E73 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RAPH1Q70E73 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAPH1Q70E73 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RAPH1Q70E73 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAPH1Q70E73 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAPH1Q70E73 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAPH1Q70E73 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RAPH1Q70E73 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAPH1Q70E73 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAPH1Q70E73 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAPH1Q70E73 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAPH1Q70E73 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAPH1Q70E73 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAPH1Q70E73 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAPH1Q70E73 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAPH1Q70E73 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAPH1Q70E73 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAPH1Q70E73 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 AL596275.1-201ENST00000423464 877 ntBASIC17.71■□□□□ 0.43
RAPH1Q70E73 ATP5G1P1-201ENST00000448724 379 ntBASIC17.71■□□□□ 0.43
RAPH1Q70E73 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAPH1Q70E73 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAPH1Q70E73 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RAPH1Q70E73 AP001094.4-201ENST00000579008 2176 ntBASIC17.71■□□□□ 0.43
RAPH1Q70E73 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms