Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 AL031133.1-201ENST00000406807 723 ntBASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 TSPY12P-201ENST00000421279 868 ntBASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 AC009154.2-201ENST00000621177 724 ntBASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 AC006116.8-202ENST00000587620 1550 ntBASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRFN4Q6PJG9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.14
LRFN4Q6PJG9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 MST1L-201ENST00000442552 2185 ntBASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 AL136038.3-201ENST00000561909 1096 ntBASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 AL390719.2-201ENST00000606993 987 ntBASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 Z83836.1-201ENST00000624605 1642 ntBASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LRFN4Q6PJG9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 AL645929.1-201ENST00000420084 975 ntBASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRFN4Q6PJG9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms