Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 TIMM8BP1-201ENST00000452384 211 ntBASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 AC015911.4-201ENST00000588022 1070 ntBASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 AC009093.7-201ENST00000623853 1223 ntBASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.8■□□□□ 0.6
CNKSR3Q6P9H4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 AL627223.1-201ENST00000416693 442 ntBASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 AC067863.1-201ENST00000494933 530 ntBASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 AC026120.1-201ENST00000611536 926 ntBASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNKSR3Q6P9H4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 FAM86C2P-203ENST00000528684 1004 ntBASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 AC093520.2-201ENST00000561830 333 ntBASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 MIR4745-201ENST00000577608 62 ntBASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNKSR3Q6P9H4 AC120498.9-201ENST00000339021 3867 ntBASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 AC129492.6-201ENST00000611383 1305 ntBASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 AL355306.1-201ENST00000415580 579 ntBASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 AC138761.1-201ENST00000584393 385 ntBASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.77■□□□□ 0.6
CNKSR3Q6P9H4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms