Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF549Q6P9A3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 AL138831.2-201ENST00000606564 490 ntBASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF549Q6P9A3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 AP001094.4-201ENST00000579008 2176 ntBASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF549Q6P9A3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF549Q6P9A3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
ZNF549Q6P9A3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
ZNF549Q6P9A3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
ZNF549Q6P9A3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ZNF549Q6P9A3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms