Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT40Q6A162 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT40Q6A162 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT40Q6A162 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT40Q6A162 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT40Q6A162 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT40Q6A162 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT40Q6A162 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT40Q6A162 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT40Q6A162 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT40Q6A162 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.4■□□□□ 0.86
KRT40Q6A162 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
KRT40Q6A162 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT40Q6A162 AL160237.2-201ENST00000556165 472 ntBASIC20.4■□□□□ 0.86
KRT40Q6A162 AC011840.4-201ENST00000578471 627 ntBASIC20.4■□□□□ 0.86
KRT40Q6A162 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
KRT40Q6A162 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.4■□□□□ 0.86
KRT40Q6A162 AL671883.3-201ENST00000603274 991 ntBASIC20.4■□□□□ 0.86
KRT40Q6A162 AL138831.2-201ENST00000606564 490 ntBASIC20.4■□□□□ 0.86
KRT40Q6A162 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT40Q6A162 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.4■□□□□ 0.86
KRT40Q6A162 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT40Q6A162 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT40Q6A162 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT40Q6A162 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT40Q6A162 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT40Q6A162 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.39■□□□□ 0.85
KRT40Q6A162 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT40Q6A162 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
KRT40Q6A162 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT40Q6A162 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT40Q6A162 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT40Q6A162 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
KRT40Q6A162 COX5BP2-201ENST00000392354 334 ntBASIC20.39■□□□□ 0.85
KRT40Q6A162 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT40Q6A162 AC007967.3-201ENST00000434308 558 ntBASIC20.39■□□□□ 0.85
KRT40Q6A162 NUS1P1-201ENST00000446295 882 ntBASIC20.39■□□□□ 0.85
KRT40Q6A162 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.39■□□□□ 0.85
KRT40Q6A162 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.39■□□□□ 0.85
KRT40Q6A162 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.39■□□□□ 0.85
KRT40Q6A162 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT40Q6A162 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.39■□□□□ 0.85
KRT40Q6A162 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT40Q6A162 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT40Q6A162 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT40Q6A162 CROCCP2-202ENST00000412962 2773 ntBASIC20.39■□□□□ 0.85
KRT40Q6A162 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT40Q6A162 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT40Q6A162 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
KRT40Q6A162 TSPY19P-201ENST00000418461 509 ntBASIC20.38■□□□□ 0.85
KRT40Q6A162 TSPY18P-201ENST00000441642 509 ntBASIC20.38■□□□□ 0.85
KRT40Q6A162 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
KRT40Q6A162 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.38■□□□□ 0.85
KRT40Q6A162 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.38■□□□□ 0.85
KRT40Q6A162 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.38■□□□□ 0.85
KRT40Q6A162 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 AP005901.3-202ENST00000581653 237 ntBASIC20.38■□□□□ 0.85
KRT40Q6A162 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT40Q6A162 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT40Q6A162 AC139530.3-201ENST00000620344 690 ntBASIC20.38■□□□□ 0.85
KRT40Q6A162 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.38■□□□□ 0.85
KRT40Q6A162 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
KRT40Q6A162 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
KRT40Q6A162 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT40Q6A162 AC090340.1-201ENST00000620778 4980 ntBASIC20.37■□□□□ 0.85
KRT40Q6A162 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
KRT40Q6A162 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT40Q6A162 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT40Q6A162 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT40Q6A162 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT40Q6A162 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT40Q6A162 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT40Q6A162 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT40Q6A162 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
KRT40Q6A162 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT40Q6A162 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.37■□□□□ 0.85
KRT40Q6A162 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.37■□□□□ 0.85
KRT40Q6A162 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.37■□□□□ 0.85
KRT40Q6A162 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.37■□□□□ 0.85
KRT40Q6A162 SLC25A6P4-201ENST00000586535 553 ntBASIC20.37■□□□□ 0.85
KRT40Q6A162 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT40Q6A162 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
KRT40Q6A162 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT40Q6A162 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms