Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 DFFBP1-201ENST00000433250 979 ntBASIC16.93■□□□□ 0.3
RIF1Q5UIP0 ACTBP11-201ENST00000436287 1126 ntBASIC16.93■□□□□ 0.3
RIF1Q5UIP0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 COX11-210ENST00000639671 696 ntBASIC16.93■□□□□ 0.3
RIF1Q5UIP0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 GABARAPL3-202ENST00000624044 1851 ntBASIC16.93■□□□□ 0.3
RIF1Q5UIP0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 AC022210.1-201ENST00000449856 793 ntBASIC16.93■□□□□ 0.3
RIF1Q5UIP0 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 REXO1L6P-201ENST00000603433 1515 ntBASIC16.93■□□□□ 0.3
RIF1Q5UIP0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIF1Q5UIP0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.92■□□□□ 0.3
RIF1Q5UIP0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 AC073592.8-201ENST00000624126 511 ntBASIC16.92■□□□□ 0.3
RIF1Q5UIP0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 AC100803.2-201ENST00000562459 1963 ntBASIC16.92■□□□□ 0.3
RIF1Q5UIP0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIF1Q5UIP0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.91■□□□□ 0.3
RIF1Q5UIP0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 COX5BP2-201ENST00000392354 334 ntBASIC16.9■□□□□ 0.3
RIF1Q5UIP0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 MIR4259-201ENST00000584466 101 ntBASIC16.9■□□□□ 0.3
RIF1Q5UIP0 AC003101.2-201ENST00000612557 442 ntBASIC16.9■□□□□ 0.3
RIF1Q5UIP0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIF1Q5UIP0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms