Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNAP47Q5SQN1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SNAP47Q5SQN1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
SNAP47Q5SQN1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
SNAP47Q5SQN1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
SNAP47Q5SQN1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
SNAP47Q5SQN1 AC073592.3-201ENST00000625118 1834 ntBASIC17.14■□□□□ 0.34
SNAP47Q5SQN1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 AC011270.2-201ENST00000624293 2550 ntBASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 SLC25A1P1-201ENST00000528351 927 ntBASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SNAP47Q5SQN1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 AC007967.3-201ENST00000434308 558 ntBASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 SART3-203ENST00000546611 1184 ntBASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 AC243591.1-201ENST00000452967 1364 ntBASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 AC104581.1-202ENST00000635932 2618 ntBASIC17.13■□□□□ 0.33
SNAP47Q5SQN1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms