Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC109462.3-201ENST00000573934 613 ntBASIC21.23■□□□□ 0.99
RFX7Q2KHR2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 AC117500.6-201ENST00000624871 588 ntBASIC21.23■□□□□ 0.99
RFX7Q2KHR2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.23■□□□□ 0.99
RFX7Q2KHR2 AC107918.4-202ENST00000641623 219 ntBASIC21.23■□□□□ 0.99
RFX7Q2KHR2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFX7Q2KHR2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.22■□□□□ 0.99
RFX7Q2KHR2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RFX7Q2KHR2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.22■□□□□ 0.99
RFX7Q2KHR2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.22■□□□□ 0.99
RFX7Q2KHR2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFX7Q2KHR2 LYSMD4-203ENST00000378904 2122 ntBASIC21.22■□□□□ 0.99
RFX7Q2KHR2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.22■□□□□ 0.99
RFX7Q2KHR2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.22■□□□□ 0.99
RFX7Q2KHR2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFX7Q2KHR2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFX7Q2KHR2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFX7Q2KHR2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RFX7Q2KHR2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFX7Q2KHR2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
RFX7Q2KHR2 PGAM5P1-201ENST00000518923 814 ntBASIC21.22■□□□□ 0.99
RFX7Q2KHR2 OR7E14P-202ENST00000530490 1290 ntBASIC21.22■□□□□ 0.99
RFX7Q2KHR2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.22■□□□□ 0.99
RFX7Q2KHR2 AC034105.1-201ENST00000563488 319 ntBASIC21.22■□□□□ 0.99
RFX7Q2KHR2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.22■□□□□ 0.99
RFX7Q2KHR2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 PCDHB18P-201ENST00000524813 2368 ntBASIC21.21■□□□□ 0.99
RFX7Q2KHR2 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.21■□□□□ 0.99
RFX7Q2KHR2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 AC003669.1-201ENST00000334569 611 ntBASIC21.21■□□□□ 0.99
RFX7Q2KHR2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 MTDHP4-201ENST00000600287 670 ntBASIC21.21■□□□□ 0.99
RFX7Q2KHR2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.21■□□□□ 0.99
RFX7Q2KHR2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 SIGLEC16-201ENST00000599858 1437 ntBASIC21.2■□□□□ 0.98
RFX7Q2KHR2 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFX7Q2KHR2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 LAGE3P1-201ENST00000425356 484 ntBASIC21.19■□□□□ 0.98
RFX7Q2KHR2 KRT18P27-201ENST00000427733 1299 ntBASIC21.19■□□□□ 0.98
RFX7Q2KHR2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms