Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYPL1Q16563 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYPL1Q16563 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYPL1Q16563 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.4■□□□□ 0.22
SYPL1Q16563 AC010460.3-201ENST00000511359 1579 ntBASIC16.4■□□□□ 0.22
SYPL1Q16563 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYPL1Q16563 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.4■□□□□ 0.22
SYPL1Q16563 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SYPL1Q16563 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYPL1Q16563 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SYPL1Q16563 AL645929.1-201ENST00000420084 975 ntBASIC16.4■□□□□ 0.22
SYPL1Q16563 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.4■□□□□ 0.22
SYPL1Q16563 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.4■□□□□ 0.22
SYPL1Q16563 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.4■□□□□ 0.22
SYPL1Q16563 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.4■□□□□ 0.22
SYPL1Q16563 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.4■□□□□ 0.22
SYPL1Q16563 AD000864.1-201ENST00000624076 2295 ntBASIC16.4■□□□□ 0.22
SYPL1Q16563 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYPL1Q16563 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYPL1Q16563 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYPL1Q16563 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYPL1Q16563 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYPL1Q16563 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYPL1Q16563 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SYPL1Q16563 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYPL1Q16563 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.4■□□□□ 0.22
SYPL1Q16563 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SYPL1Q16563 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
SYPL1Q16563 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
SYPL1Q16563 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.39■□□□□ 0.21
SYPL1Q16563 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
SYPL1Q16563 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.39■□□□□ 0.21
SYPL1Q16563 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SYPL1Q16563 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SYPL1Q16563 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.39■□□□□ 0.21
SYPL1Q16563 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.39■□□□□ 0.21
SYPL1Q16563 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.39■□□□□ 0.21
SYPL1Q16563 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.39■□□□□ 0.21
SYPL1Q16563 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.39■□□□□ 0.21
SYPL1Q16563 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.39■□□□□ 0.21
SYPL1Q16563 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.39■□□□□ 0.21
SYPL1Q16563 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SYPL1Q16563 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SYPL1Q16563 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.39■□□□□ 0.21
SYPL1Q16563 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.39■□□□□ 0.21
SYPL1Q16563 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.39■□□□□ 0.21
SYPL1Q16563 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.39■□□□□ 0.21
SYPL1Q16563 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYPL1Q16563 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.39■□□□□ 0.21
SYPL1Q16563 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SYPL1Q16563 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SYPL1Q16563 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.38■□□□□ 0.21
SYPL1Q16563 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.38■□□□□ 0.21
SYPL1Q16563 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SYPL1Q16563 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SYPL1Q16563 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.38■□□□□ 0.21
SYPL1Q16563 TMPOP1-202ENST00000424642 1267 ntBASIC16.38■□□□□ 0.21
SYPL1Q16563 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SYPL1Q16563 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.38■□□□□ 0.21
SYPL1Q16563 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.38■□□□□ 0.21
SYPL1Q16563 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYPL1Q16563 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms