Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
CACNA1EQ15878 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 AL121761.2-201ENST00000598007 1648 ntBASIC17.03■□□□□ 0.32
CACNA1EQ15878 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1EQ15878 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1EQ15878 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
CACNA1EQ15878 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA1EQ15878 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1EQ15878 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1EQ15878 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA1EQ15878 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1EQ15878 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1EQ15878 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1EQ15878 AC005034.1-201ENST00000426657 489 ntBASIC17.02■□□□□ 0.32
CACNA1EQ15878 IGHV3-52-201ENST00000519770 353 ntBASIC17.02■□□□□ 0.32
CACNA1EQ15878 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA1EQ15878 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1EQ15878 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.02■□□□□ 0.32
CACNA1EQ15878 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA1EQ15878 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1EQ15878 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA1EQ15878 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1EQ15878 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA1EQ15878 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1EQ15878 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CACNA1EQ15878 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.02■□□□□ 0.31
CACNA1EQ15878 HTR7P1-202ENST00000624664 4411 ntBASIC17.02■□□□□ 0.31
CACNA1EQ15878 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CACNA1EQ15878 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CACNA1EQ15878 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CACNA1EQ15878 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CACNA1EQ15878 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CACNA1EQ15878 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CACNA1EQ15878 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.02■□□□□ 0.31
CACNA1EQ15878 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CACNA1EQ15878 AC087163.2-201ENST00000457299 853 ntBASIC17.02■□□□□ 0.31
CACNA1EQ15878 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CACNA1EQ15878 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.31
CACNA1EQ15878 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.02■□□□□ 0.31
CACNA1EQ15878 AC009093.7-201ENST00000623853 1223 ntBASIC17.02■□□□□ 0.31
CACNA1EQ15878 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CACNA1EQ15878 AC006116.8-202ENST00000587620 1550 ntBASIC17.02■□□□□ 0.31
CACNA1EQ15878 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.02■□□□□ 0.31
CACNA1EQ15878 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 AC004835.2-201ENST00000603762 682 ntBASIC17.01■□□□□ 0.31
CACNA1EQ15878 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 AP001059.3-201ENST00000619053 235 ntBASIC17.01■□□□□ 0.31
CACNA1EQ15878 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 AC015922.1-201ENST00000421102 1152 ntBASIC17.01■□□□□ 0.31
CACNA1EQ15878 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 AC005225.4-201ENST00000557330 545 ntBASIC17.01■□□□□ 0.31
CACNA1EQ15878 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CACNA1EQ15878 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1EQ15878 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CACNA1EQ15878 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CACNA1EQ15878 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17■□□□□ 0.31
CACNA1EQ15878 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17■□□□□ 0.31
CACNA1EQ15878 AC092919.2-201ENST00000623631 1645 ntBASIC17■□□□□ 0.31
CACNA1EQ15878 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms