Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
IRX3P78415 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.47■□□□□ 0.87
IRX3P78415 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.47■□□□□ 0.87
IRX3P78415 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IRX3P78415 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
IRX3P78415 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IRX3P78415 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IRX3P78415 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
IRX3P78415 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IRX3P78415 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX3P78415 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IRX3P78415 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IRX3P78415 SIRPAP1-201ENST00000448467 1770 ntBASIC20.46■□□□□ 0.87
IRX3P78415 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX3P78415 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX3P78415 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.46■□□□□ 0.87
IRX3P78415 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX3P78415 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.46■□□□□ 0.87
IRX3P78415 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
IRX3P78415 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX3P78415 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
IRX3P78415 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IRX3P78415 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IRX3P78415 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX3P78415 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
IRX3P78415 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.46■□□□□ 0.87
IRX3P78415 AC211486.1-202ENST00000416371 468 ntBASIC20.46■□□□□ 0.87
IRX3P78415 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.46■□□□□ 0.87
IRX3P78415 DNAJB3-202ENST00000449667 1266 ntBASIC20.46■□□□□ 0.87
IRX3P78415 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.46■□□□□ 0.87
IRX3P78415 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.46■□□□□ 0.87
IRX3P78415 AC211476.1-201ENST00000503899 468 ntBASIC20.46■□□□□ 0.87
IRX3P78415 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.46■□□□□ 0.87
IRX3P78415 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.46■□□□□ 0.87
IRX3P78415 AL355385.1-201ENST00000606123 409 ntBASIC20.46■□□□□ 0.87
IRX3P78415 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.46■□□□□ 0.87
IRX3P78415 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.46■□□□□ 0.87
IRX3P78415 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IRX3P78415 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.46■□□□□ 0.87
IRX3P78415 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX3P78415 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX3P78415 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX3P78415 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
IRX3P78415 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX3P78415 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.46■□□□□ 0.87
IRX3P78415 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IRX3P78415 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
IRX3P78415 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IRX3P78415 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IRX3P78415 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.45■□□□□ 0.86
IRX3P78415 ELK2BP-201ENST00000415014 1224 ntBASIC20.45■□□□□ 0.86
IRX3P78415 HMGN1P19-201ENST00000436976 333 ntBASIC20.45■□□□□ 0.86
IRX3P78415 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.45■□□□□ 0.86
IRX3P78415 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.45■□□□□ 0.86
IRX3P78415 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
IRX3P78415 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.45■□□□□ 0.86
IRX3P78415 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
IRX3P78415 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
IRX3P78415 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.44■□□□□ 0.86
IRX3P78415 KRT18P2-201ENST00000447938 1258 ntBASIC20.44■□□□□ 0.86
IRX3P78415 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.44■□□□□ 0.86
IRX3P78415 DUTP2-201ENST00000519164 463 ntBASIC20.44■□□□□ 0.86
IRX3P78415 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.44■□□□□ 0.86
IRX3P78415 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.44■□□□□ 0.86
IRX3P78415 AC027796.2-201ENST00000575326 344 ntBASIC20.44■□□□□ 0.86
IRX3P78415 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
IRX3P78415 AC004706.3-202ENST00000621574 984 ntBASIC20.44■□□□□ 0.86
IRX3P78415 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 HCG11-201ENST00000411553 5696 ntBASIC20.44■□□□□ 0.86
IRX3P78415 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.44■□□□□ 0.86
IRX3P78415 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
IRX3P78415 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.44■□□□□ 0.86
IRX3P78415 AL031598.1-201ENST00000561511 1773 ntBASIC20.44■□□□□ 0.86
IRX3P78415 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IRX3P78415 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
IRX3P78415 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IRX3P78415 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
IRX3P78415 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.43■□□□□ 0.86
IRX3P78415 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IRX3P78415 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.43■□□□□ 0.86
IRX3P78415 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IRX3P78415 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
IRX3P78415 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IRX3P78415 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms