Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
YBX1P67809 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.17■□□□□ 0.34
YBX1P67809 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.17■□□□□ 0.34
YBX1P67809 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
YBX1P67809 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.17■□□□□ 0.34
YBX1P67809 CROCCP2-202ENST00000412962 2773 ntBASIC17.17■□□□□ 0.34
YBX1P67809 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
YBX1P67809 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
YBX1P67809 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.17■□□□□ 0.34
YBX1P67809 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.17■□□□□ 0.34
YBX1P67809 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.17■□□□□ 0.34
YBX1P67809 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
YBX1P67809 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.17■□□□□ 0.34
YBX1P67809 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.17■□□□□ 0.34
YBX1P67809 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
YBX1P67809 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.17■□□□□ 0.34
YBX1P67809 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
YBX1P67809 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.17■□□□□ 0.34
YBX1P67809 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YBX1P67809 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
YBX1P67809 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
YBX1P67809 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.16■□□□□ 0.34
YBX1P67809 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.16■□□□□ 0.34
YBX1P67809 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
YBX1P67809 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
YBX1P67809 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.16■□□□□ 0.34
YBX1P67809 AC246785.2-201ENST00000432512 513 ntBASIC17.16■□□□□ 0.34
YBX1P67809 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.16■□□□□ 0.34
YBX1P67809 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.16■□□□□ 0.34
YBX1P67809 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.16■□□□□ 0.34
YBX1P67809 BNIP3P18-201ENST00000593976 575 ntBASIC17.16■□□□□ 0.34
YBX1P67809 CLEC4GP1-201ENST00000596555 870 ntBASIC17.16■□□□□ 0.34
YBX1P67809 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.16■□□□□ 0.34
YBX1P67809 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.16■□□□□ 0.34
YBX1P67809 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.16■□□□□ 0.34
YBX1P67809 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.16■□□□□ 0.34
YBX1P67809 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.16■□□□□ 0.34
YBX1P67809 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
YBX1P67809 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.15■□□□□ 0.34
YBX1P67809 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.15■□□□□ 0.34
YBX1P67809 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YBX1P67809 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YBX1P67809 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
YBX1P67809 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
YBX1P67809 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.15■□□□□ 0.34
YBX1P67809 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
YBX1P67809 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.15■□□□□ 0.34
YBX1P67809 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
YBX1P67809 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.15■□□□□ 0.34
YBX1P67809 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.15■□□□□ 0.34
YBX1P67809 AC012615.1-201ENST00000565797 1299 ntBASIC17.15■□□□□ 0.34
YBX1P67809 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.15■□□□□ 0.34
YBX1P67809 Z69720.1-201ENST00000601483 472 ntBASIC17.15■□□□□ 0.34
YBX1P67809 AC099336.1-202ENST00000602961 463 ntBASIC17.15■□□□□ 0.34
YBX1P67809 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
YBX1P67809 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YBX1P67809 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YBX1P67809 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YBX1P67809 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YBX1P67809 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YBX1P67809 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
YBX1P67809 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YBX1P67809 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms