Protein–RNA interactions for Protein: P59091

LINC00315, Putative uncharacterized protein encoded by LINC00315, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00315P59091 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00315P59091 KRT89P-201ENST00000620027 1478 ntBASIC12.69□□□□□ -0.38
LINC00315P59091 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00315P59091 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00315P59091 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00315P59091 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00315P59091 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LINC00315P59091 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00315P59091 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00315P59091 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00315P59091 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00315P59091 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00315P59091 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LINC00315P59091 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00315P59091 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00315P59091 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
LINC00315P59091 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00315P59091 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LINC00315P59091 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00315P59091 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LINC00315P59091 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 AC018695.7-201ENST00000624587 2492 ntBASIC12.68□□□□□ -0.38
LINC00315P59091 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LINC00315P59091 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00315P59091 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00315P59091 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00315P59091 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LINC00315P59091 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00315P59091 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00315P59091 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00315P59091 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00315P59091 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00315P59091 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00315P59091 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00315P59091 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.68□□□□□ -0.38
LINC00315P59091 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00315P59091 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LINC00315P59091 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00315P59091 LINC01311-201ENST00000565162 1445 ntBASIC12.68□□□□□ -0.38
LINC00315P59091 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00315P59091 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LINC00315P59091 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 PCDHA14-201ENST00000506751 2298 ntBASIC12.68□□□□□ -0.38
LINC00315P59091 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00315P59091 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00315P59091 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
LINC00315P59091 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
LINC00315P59091 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00315P59091 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00315P59091 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00315P59091 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00315P59091 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00315P59091 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00315P59091 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00315P59091 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00315P59091 FLJ38576-201ENST00000623820 2459 ntBASIC12.67□□□□□ -0.38
LINC00315P59091 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
LINC00315P59091 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LINC00315P59091 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00315P59091 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00315P59091 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00315P59091 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LINC00315P59091 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00315P59091 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00315P59091 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00315P59091 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00315P59091 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00315P59091 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC00315P59091 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00315P59091 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00315P59091 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms