Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ELK2BP-201ENST00000415014 1224 ntBASIC17.36■□□□□ 0.37
CLDN2P57739 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN2P57739 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN2P57739 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN2P57739 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CLDN2P57739 SIGLEC30P-201ENST00000455569 941 ntBASIC17.36■□□□□ 0.37
CLDN2P57739 AC136632.2-201ENST00000512891 861 ntBASIC17.36■□□□□ 0.37
CLDN2P57739 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN2P57739 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CLDN2P57739 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CLDN2P57739 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 AC006504.4-201ENST00000592118 1568 ntBASIC17.36■□□□□ 0.37
CLDN2P57739 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN2P57739 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN2P57739 HCG11-201ENST00000411553 5696 ntBASIC17.36■□□□□ 0.37
CLDN2P57739 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLDN2P57739 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN2P57739 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.35■□□□□ 0.37
CLDN2P57739 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLDN2P57739 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CLDN2P57739 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN2P57739 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLDN2P57739 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.35■□□□□ 0.37
CLDN2P57739 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CLDN2P57739 AL591424.1-201ENST00000442569 1213 ntBASIC17.35■□□□□ 0.37
CLDN2P57739 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.35■□□□□ 0.37
CLDN2P57739 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN2P57739 STK19B-204ENST00000512515 211 ntBASIC17.35■□□□□ 0.37
CLDN2P57739 IGHV3-52-201ENST00000519770 353 ntBASIC17.35■□□□□ 0.37
CLDN2P57739 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN2P57739 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN2P57739 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN2P57739 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN2P57739 AL139424.1-201ENST00000607572 797 ntBASIC17.35■□□□□ 0.37
CLDN2P57739 AC004706.3-202ENST00000621574 984 ntBASIC17.35■□□□□ 0.37
CLDN2P57739 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN2P57739 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN2P57739 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CLDN2P57739 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLDN2P57739 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN2P57739 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CLDN2P57739 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN2P57739 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN2P57739 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN2P57739 FLJ13224-201ENST00000313737 1514 ntBASIC17.34■□□□□ 0.37
CLDN2P57739 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN2P57739 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLDN2P57739 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN2P57739 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN2P57739 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN2P57739 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLDN2P57739 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN2P57739 MIR1233-2-201ENST00000408138 82 ntBASIC17.34■□□□□ 0.37
CLDN2P57739 MIR1233-1-201ENST00000408722 82 ntBASIC17.34■□□□□ 0.37
CLDN2P57739 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.34■□□□□ 0.37
CLDN2P57739 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN2P57739 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN2P57739 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.34■□□□□ 0.37
CLDN2P57739 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN2P57739 AC108751.1-201ENST00000490852 363 ntBASIC17.34■□□□□ 0.37
CLDN2P57739 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN2P57739 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN2P57739 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN2P57739 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLDN2P57739 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN2P57739 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLDN2P57739 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN2P57739 STK25P1-201ENST00000585406 838 ntBASIC17.34■□□□□ 0.37
CLDN2P57739 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN2P57739 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLDN2P57739 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN2P57739 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN2P57739 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms