Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLDN6P56747 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 PHGDH-209ENST00000641074 1780 ntBASIC16.86■□□□□ 0.29
CLDN6P56747 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN6P56747 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN6P56747 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN6P56747 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CLDN6P56747 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CLDN6P56747 AL049757.1-201ENST00000616842 1596 ntBASIC16.85■□□□□ 0.29
CLDN6P56747 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN6P56747 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CLDN6P56747 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN6P56747 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.85■□□□□ 0.29
CLDN6P56747 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN6P56747 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN6P56747 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLDN6P56747 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN6P56747 KRT19P2-202ENST00000557173 1012 ntBASIC16.85■□□□□ 0.29
CLDN6P56747 PDPK2P-202ENST00000562415 1191 ntBASIC16.85■□□□□ 0.29
CLDN6P56747 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN6P56747 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN6P56747 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN6P56747 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CLDN6P56747 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CLDN6P56747 NCF1C-201ENST00000438382 1427 ntBASIC16.85■□□□□ 0.29
CLDN6P56747 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN6P56747 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.85■□□□□ 0.29
CLDN6P56747 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN6P56747 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN6P56747 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN6P56747 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN6P56747 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CLDN6P56747 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLDN6P56747 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLDN6P56747 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
CLDN6P56747 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDN6P56747 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDN6P56747 COX5BP2-201ENST00000392354 334 ntBASIC16.84■□□□□ 0.29
CLDN6P56747 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDN6P56747 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CLDN6P56747 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDN6P56747 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLDN6P56747 SPCS2P1-201ENST00000561636 679 ntBASIC16.84■□□□□ 0.29
CLDN6P56747 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN6P56747 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDN6P56747 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 AL353593.2-201ENST00000602529 1483 ntBASIC16.84■□□□□ 0.29
CLDN6P56747 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
CLDN6P56747 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN6P56747 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN6P56747 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLDN6P56747 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN6P56747 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN6P56747 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CLDN6P56747 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLDN6P56747 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CLDN6P56747 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLDN6P56747 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLDN6P56747 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms