Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HDAC4P56524 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
HDAC4P56524 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC4P56524 NSUN5P1-202ENST00000421140 1535 ntBASIC18.41■□□□□ 0.54
HDAC4P56524 NSUN5P2-203ENST00000457352 1529 ntBASIC18.41■□□□□ 0.54
HDAC4P56524 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC4P56524 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC4P56524 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC4P56524 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
HDAC4P56524 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HDAC4P56524 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.41■□□□□ 0.54
HDAC4P56524 AC092329.2-201ENST00000598402 547 ntBASIC18.41■□□□□ 0.54
HDAC4P56524 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.41■□□□□ 0.54
HDAC4P56524 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.41■□□□□ 0.54
HDAC4P56524 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.41■□□□□ 0.54
HDAC4P56524 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HDAC4P56524 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HDAC4P56524 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC4P56524 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC4P56524 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC4P56524 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC4P56524 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.41■□□□□ 0.54
HDAC4P56524 HTR7P1-202ENST00000624664 4411 ntBASIC18.41■□□□□ 0.54
HDAC4P56524 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.41■□□□□ 0.54
HDAC4P56524 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.41■□□□□ 0.54
HDAC4P56524 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC4P56524 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.4■□□□□ 0.54
HDAC4P56524 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.4■□□□□ 0.54
HDAC4P56524 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
HDAC4P56524 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 AP000867.3-201ENST00000524675 377 ntBASIC18.4■□□□□ 0.54
HDAC4P56524 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.4■□□□□ 0.54
HDAC4P56524 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.4■□□□□ 0.54
HDAC4P56524 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.4■□□□□ 0.54
HDAC4P56524 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HDAC4P56524 BNIP3P18-201ENST00000593976 575 ntBASIC18.4■□□□□ 0.54
HDAC4P56524 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
HDAC4P56524 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.4■□□□□ 0.54
HDAC4P56524 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.4■□□□□ 0.54
HDAC4P56524 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.4■□□□□ 0.54
HDAC4P56524 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.4■□□□□ 0.54
HDAC4P56524 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC4P56524 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.39■□□□□ 0.54
HDAC4P56524 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
HDAC4P56524 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
HDAC4P56524 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HDAC4P56524 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC4P56524 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC4P56524 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC4P56524 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.39■□□□□ 0.53
HDAC4P56524 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC4P56524 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.39■□□□□ 0.53
HDAC4P56524 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.39■□□□□ 0.53
HDAC4P56524 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC4P56524 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.39■□□□□ 0.53
HDAC4P56524 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.39■□□□□ 0.53
HDAC4P56524 AC009533.2-201ENST00000543664 586 ntBASIC18.39■□□□□ 0.53
HDAC4P56524 AC074051.2-201ENST00000565115 352 ntBASIC18.39■□□□□ 0.53
HDAC4P56524 AC011467.2-201ENST00000598425 242 ntBASIC18.39■□□□□ 0.53
HDAC4P56524 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC4P56524 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.39■□□□□ 0.53
HDAC4P56524 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC4P56524 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.39■□□□□ 0.53
HDAC4P56524 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.39■□□□□ 0.53
HDAC4P56524 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC4P56524 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC4P56524 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC4P56524 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC4P56524 TP73-AS1-210ENST00000637775 1455 ntBASIC18.39■□□□□ 0.53
HDAC4P56524 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC4P56524 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC4P56524 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.38■□□□□ 0.53
HDAC4P56524 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC4P56524 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC4P56524 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC4P56524 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC4P56524 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
HDAC4P56524 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC4P56524 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC4P56524 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.38■□□□□ 0.53
HDAC4P56524 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC4P56524 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms