Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LIMK2P53671 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LIMK2P53671 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LIMK2P53671 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LIMK2P53671 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.77■□□□□ 0.44
LIMK2P53671 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LIMK2P53671 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.77■□□□□ 0.44
LIMK2P53671 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
LIMK2P53671 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
LIMK2P53671 DRAXINP1-201ENST00000437611 948 ntBASIC17.77■□□□□ 0.44
LIMK2P53671 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.77■□□□□ 0.44
LIMK2P53671 NUS1P1-201ENST00000446295 882 ntBASIC17.77■□□□□ 0.44
LIMK2P53671 AP003733.1-201ENST00000491725 852 ntBASIC17.77■□□□□ 0.44
LIMK2P53671 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LIMK2P53671 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.77■□□□□ 0.44
LIMK2P53671 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.77■□□□□ 0.44
LIMK2P53671 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LIMK2P53671 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LIMK2P53671 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.77■□□□□ 0.44
LIMK2P53671 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LIMK2P53671 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LIMK2P53671 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LIMK2P53671 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.77■□□□□ 0.43
LIMK2P53671 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LIMK2P53671 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LIMK2P53671 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LIMK2P53671 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LIMK2P53671 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.77■□□□□ 0.43
LIMK2P53671 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK2P53671 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK2P53671 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LIMK2P53671 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.76■□□□□ 0.43
LIMK2P53671 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.76■□□□□ 0.43
LIMK2P53671 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK2P53671 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.76■□□□□ 0.43
LIMK2P53671 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK2P53671 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK2P53671 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK2P53671 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.76■□□□□ 0.43
LIMK2P53671 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK2P53671 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK2P53671 TPSP2-201ENST00000561760 610 ntBASIC17.76■□□□□ 0.43
LIMK2P53671 AC111152.3-201ENST00000569699 673 ntBASIC17.76■□□□□ 0.43
LIMK2P53671 AC005332.3-201ENST00000589904 676 ntBASIC17.76■□□□□ 0.43
LIMK2P53671 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.76■□□□□ 0.43
LIMK2P53671 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK2P53671 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK2P53671 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK2P53671 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.76■□□□□ 0.43
LIMK2P53671 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK2P53671 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK2P53671 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK2P53671 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LIMK2P53671 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.76■□□□□ 0.43
LIMK2P53671 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LIMK2P53671 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LIMK2P53671 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LIMK2P53671 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK2P53671 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK2P53671 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK2P53671 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK2P53671 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK2P53671 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK2P53671 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.75■□□□□ 0.43
LIMK2P53671 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LIMK2P53671 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK2P53671 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK2P53671 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK2P53671 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK2P53671 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK2P53671 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.75■□□□□ 0.43
LIMK2P53671 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.75■□□□□ 0.43
LIMK2P53671 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.75■□□□□ 0.43
LIMK2P53671 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK2P53671 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.75■□□□□ 0.43
LIMK2P53671 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LIMK2P53671 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.75■□□□□ 0.43
LIMK2P53671 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LIMK2P53671 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.75■□□□□ 0.43
LIMK2P53671 AD000864.1-201ENST00000624076 2295 ntBASIC17.75■□□□□ 0.43
LIMK2P53671 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LIMK2P53671 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK2P53671 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.75■□□□□ 0.43
LIMK2P53671 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.75■□□□□ 0.43
LIMK2P53671 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK2P53671 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
LIMK2P53671 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK2P53671 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK2P53671 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.74■□□□□ 0.43
LIMK2P53671 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LIMK2P53671 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.74■□□□□ 0.43
LIMK2P53671 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK2P53671 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LIMK2P53671 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.74■□□□□ 0.43
LIMK2P53671 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms