Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.28■□□□□ 0.04
HCFC1P51610 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HCFC1P51610 SNHG9-202ENST00000564014 471 ntBASIC15.28■□□□□ 0.04
HCFC1P51610 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.28■□□□□ 0.04
HCFC1P51610 AC068137.2-201ENST00000605408 478 ntBASIC15.28■□□□□ 0.04
HCFC1P51610 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCFC1P51610 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
HCFC1P51610 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.28■□□□□ 0.04
HCFC1P51610 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCFC1P51610 AC018470.1-201ENST00000624790 3129 ntBASIC15.28■□□□□ 0.04
HCFC1P51610 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCFC1P51610 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HCFC1P51610 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCFC1P51610 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCFC1P51610 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HCFC1P51610 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.28■□□□□ 0.04
HCFC1P51610 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.28■□□□□ 0.04
HCFC1P51610 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.28■□□□□ 0.04
HCFC1P51610 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HCFC1P51610 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCFC1P51610 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HCFC1P51610 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HCFC1P51610 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.28■□□□□ 0.04
HCFC1P51610 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HCFC1P51610 AL049757.1-201ENST00000616842 1596 ntBASIC15.28■□□□□ 0.04
HCFC1P51610 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HCFC1P51610 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1P51610 AL035633.1-201ENST00000406139 838 ntBASIC15.27■□□□□ 0.04
HCFC1P51610 IGLL3P-201ENST00000412472 434 ntBASIC15.27■□□□□ 0.04
HCFC1P51610 IGHV3-65-201ENST00000523210 341 ntBASIC15.27■□□□□ 0.04
HCFC1P51610 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.27■□□□□ 0.04
HCFC1P51610 AC019129.2-201ENST00000609837 1235 ntBASIC15.27■□□□□ 0.04
HCFC1P51610 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1P51610 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1P51610 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.27■□□□□ 0.04
HCFC1P51610 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1P51610 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1P51610 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1P51610 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1P51610 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
HCFC1P51610 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HCFC1P51610 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.27■□□□□ 0.04
HCFC1P51610 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
HCFC1P51610 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1P51610 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1P51610 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1P51610 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1P51610 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1P51610 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1P51610 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.27■□□□□ 0.03
HCFC1P51610 PRSS29P-201ENST00000440800 595 ntBASIC15.27■□□□□ 0.03
HCFC1P51610 VN2R19P-201ENST00000442399 1052 ntBASIC15.27■□□□□ 0.03
HCFC1P51610 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.27■□□□□ 0.03
HCFC1P51610 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.27■□□□□ 0.03
HCFC1P51610 AP002472.1-201ENST00000577490 586 ntBASIC15.27■□□□□ 0.03
HCFC1P51610 MIR3197-201ENST00000582241 73 ntBASIC15.27■□□□□ 0.03
HCFC1P51610 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.27■□□□□ 0.03
HCFC1P51610 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.03
HCFC1P51610 GGTLC5P-201ENST00000617623 998 ntBASIC15.27■□□□□ 0.03
HCFC1P51610 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1P51610 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1P51610 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1P51610 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1P51610 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1P51610 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1P51610 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1P51610 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1P51610 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HCFC1P51610 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.27■□□□□ 0.03
HCFC1P51610 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.27■□□□□ 0.03
HCFC1P51610 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HCFC1P51610 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.26■□□□□ 0.03
HCFC1P51610 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HCFC1P51610 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 CEND1P1-201ENST00000451006 455 ntBASIC15.26■□□□□ 0.03
HCFC1P51610 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
HCFC1P51610 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HCFC1P51610 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.26■□□□□ 0.03
HCFC1P51610 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.26■□□□□ 0.03
HCFC1P51610 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.26■□□□□ 0.03
HCFC1P51610 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HCFC1P51610 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 AP002414.1-201ENST00000391405 1147 ntBASIC15.26■□□□□ 0.03
HCFC1P51610 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
HCFC1P51610 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.26■□□□□ 0.03
HCFC1P51610 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.26■□□□□ 0.03
HCFC1P51610 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.26■□□□□ 0.03
HCFC1P51610 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms