Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.52■□□□□ 0.72
BRCA2P51587 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.52■□□□□ 0.72
BRCA2P51587 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.52■□□□□ 0.72
BRCA2P51587 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.52■□□□□ 0.72
BRCA2P51587 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.52■□□□□ 0.72
BRCA2P51587 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRCA2P51587 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
BRCA2P51587 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRCA2P51587 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.52■□□□□ 0.72
BRCA2P51587 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.52■□□□□ 0.72
BRCA2P51587 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BRCA2P51587 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRCA2P51587 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRCA2P51587 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRCA2P51587 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.52■□□□□ 0.72
BRCA2P51587 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BRCA2P51587 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.52■□□□□ 0.72
BRCA2P51587 AL158211.3-201ENST00000607385 239 ntBASIC19.52■□□□□ 0.72
BRCA2P51587 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
BRCA2P51587 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.52■□□□□ 0.71
BRCA2P51587 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BRCA2P51587 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
BRCA2P51587 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
BRCA2P51587 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.71
BRCA2P51587 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCA2P51587 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCA2P51587 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.51■□□□□ 0.71
BRCA2P51587 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCA2P51587 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCA2P51587 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCA2P51587 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCA2P51587 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.51■□□□□ 0.71
BRCA2P51587 AC116562.4-201ENST00000641316 2276 ntBASIC19.51■□□□□ 0.71
BRCA2P51587 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCA2P51587 AC079776.1-201ENST00000401540 1152 ntBASIC19.51■□□□□ 0.71
BRCA2P51587 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.51■□□□□ 0.71
BRCA2P51587 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.51■□□□□ 0.71
BRCA2P51587 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCA2P51587 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCA2P51587 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCA2P51587 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCA2P51587 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
BRCA2P51587 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.51■□□□□ 0.71
BRCA2P51587 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.51■□□□□ 0.71
BRCA2P51587 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.51■□□□□ 0.71
BRCA2P51587 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.51■□□□□ 0.71
BRCA2P51587 AC140878.1-201ENST00000565277 250 ntBASIC19.51■□□□□ 0.71
BRCA2P51587 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.51■□□□□ 0.71
BRCA2P51587 ACTL9-202ENST00000612068 1252 ntBASIC19.51■□□□□ 0.71
BRCA2P51587 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCA2P51587 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BRCA2P51587 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.51■□□□□ 0.71
BRCA2P51587 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.5■□□□□ 0.71
BRCA2P51587 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
BRCA2P51587 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRCA2P51587 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRCA2P51587 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.5■□□□□ 0.71
BRCA2P51587 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRCA2P51587 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.5■□□□□ 0.71
BRCA2P51587 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.5■□□□□ 0.71
BRCA2P51587 AC019129.2-201ENST00000609837 1235 ntBASIC19.5■□□□□ 0.71
BRCA2P51587 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRCA2P51587 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRCA2P51587 PI4KAP1-204ENST00000612579 1703 ntBASIC19.5■□□□□ 0.71
BRCA2P51587 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BRCA2P51587 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.5■□□□□ 0.71
BRCA2P51587 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.5■□□□□ 0.71
BRCA2P51587 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRCA2P51587 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.5■□□□□ 0.71
BRCA2P51587 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BRCA2P51587 AL358472.5-202ENST00000641448 1267 ntBASIC19.5■□□□□ 0.71
BRCA2P51587 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
BRCA2P51587 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRCA2P51587 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.49■□□□□ 0.71
BRCA2P51587 AL096828.2-201ENST00000567259 1965 ntBASIC19.49■□□□□ 0.71
BRCA2P51587 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCA2P51587 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCA2P51587 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.49■□□□□ 0.71
BRCA2P51587 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.49■□□□□ 0.71
BRCA2P51587 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRCA2P51587 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCA2P51587 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRCA2P51587 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCA2P51587 AC104581.1-202ENST00000635932 2618 ntBASIC19.49■□□□□ 0.71
BRCA2P51587 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCA2P51587 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCA2P51587 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRCA2P51587 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.49■□□□□ 0.71
BRCA2P51587 SPDYE11-202ENST00000450699 704 ntBASIC19.49■□□□□ 0.71
BRCA2P51587 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.49■□□□□ 0.71
BRCA2P51587 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.49■□□□□ 0.71
BRCA2P51587 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.49■□□□□ 0.71
BRCA2P51587 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.49■□□□□ 0.71
BRCA2P51587 SPDYE9P-201ENST00000570642 692 ntBASIC19.49■□□□□ 0.71
BRCA2P51587 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.49■□□□□ 0.71
BRCA2P51587 SPDYE10P-202ENST00000612005 668 ntBASIC19.49■□□□□ 0.71
BRCA2P51587 SPDYE8P-202ENST00000612377 668 ntBASIC19.49■□□□□ 0.71
BRCA2P51587 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCA2P51587 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
BRCA2P51587 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms