Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SRP9P49458 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.68■□□□□ 0.1
SRP9P49458 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.68■□□□□ 0.1
SRP9P49458 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.68■□□□□ 0.1
SRP9P49458 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.68■□□□□ 0.1
SRP9P49458 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SRP9P49458 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.68■□□□□ 0.1
SRP9P49458 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.68■□□□□ 0.1
SRP9P49458 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.68■□□□□ 0.1
SRP9P49458 AL441883.1-201ENST00000566170 1045 ntBASIC15.68■□□□□ 0.1
SRP9P49458 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.68■□□□□ 0.1
SRP9P49458 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SRP9P49458 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 AC008741.2-201ENST00000612792 3115 ntBASIC15.68■□□□□ 0.1
SRP9P49458 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
SRP9P49458 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
SRP9P49458 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP9P49458 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.68■□□□□ 0.1
SRP9P49458 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
SRP9P49458 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SRP9P49458 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
SRP9P49458 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SRP9P49458 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SRP9P49458 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.67■□□□□ 0.1
SRP9P49458 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SRP9P49458 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.67■□□□□ 0.1
SRP9P49458 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SRP9P49458 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SRP9P49458 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.67■□□□□ 0.1
SRP9P49458 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.67■□□□□ 0.1
SRP9P49458 AC104076.2-201ENST00000448912 469 ntBASIC15.67■□□□□ 0.1
SRP9P49458 DUX4L26-201ENST00000489078 1255 ntBASIC15.67■□□□□ 0.1
SRP9P49458 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.67■□□□□ 0.1
SRP9P49458 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.67■□□□□ 0.1
SRP9P49458 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.67■□□□□ 0.1
SRP9P49458 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 AL049597.2-201ENST00000565575 961 ntBASIC15.67■□□□□ 0.1
SRP9P49458 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 MIR3917-201ENST00000580971 93 ntBASIC15.67■□□□□ 0.1
SRP9P49458 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.67■□□□□ 0.1
SRP9P49458 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.67■□□□□ 0.1
SRP9P49458 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.67■□□□□ 0.1
SRP9P49458 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SRP9P49458 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.67■□□□□ 0.1
SRP9P49458 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.67■□□□□ 0.1
SRP9P49458 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SRP9P49458 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SRP9P49458 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRP9P49458 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
SRP9P49458 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SRP9P49458 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP9P49458 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SRP9P49458 AL355312.1-201ENST00000407115 2176 ntBASIC15.66■□□□□ 0.1
SRP9P49458 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.66■□□□□ 0.1
SRP9P49458 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP9P49458 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP9P49458 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SRP9P49458 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.66■□□□□ 0.1
SRP9P49458 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SRP9P49458 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP9P49458 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRP9P49458 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.66■□□□□ 0.1
SRP9P49458 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SRP9P49458 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.66■□□□□ 0.1
SRP9P49458 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SRP9P49458 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRP9P49458 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRP9P49458 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.66■□□□□ 0.1
SRP9P49458 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.66■□□□□ 0.1
SRP9P49458 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms