Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
CNGA1P29973 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CNGA1P29973 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CNGA1P29973 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNGA1P29973 SPDYE21P-201ENST00000413323 827 ntBASIC20■□□□□ 0.79
CNGA1P29973 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20■□□□□ 0.79
CNGA1P29973 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CNGA1P29973 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20■□□□□ 0.79
CNGA1P29973 AC122714.2-201ENST00000502787 707 ntBASIC20■□□□□ 0.79
CNGA1P29973 RFPL4AP1-201ENST00000530883 850 ntBASIC20■□□□□ 0.79
CNGA1P29973 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20■□□□□ 0.79
CNGA1P29973 AC073592.5-201ENST00000624854 528 ntBASIC20■□□□□ 0.79
CNGA1P29973 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20■□□□□ 0.79
CNGA1P29973 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CNGA1P29973 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20■□□□□ 0.79
CNGA1P29973 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20■□□□□ 0.79
CNGA1P29973 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CNGA1P29973 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNGA1P29973 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNGA1P29973 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CNGA1P29973 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CNGA1P29973 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.99■□□□□ 0.79
CNGA1P29973 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 AC135776.1-201ENST00000319817 2481 ntBASIC19.99■□□□□ 0.79
CNGA1P29973 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.99■□□□□ 0.79
CNGA1P29973 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.99■□□□□ 0.79
CNGA1P29973 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.99■□□□□ 0.79
CNGA1P29973 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.99■□□□□ 0.79
CNGA1P29973 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.99■□□□□ 0.79
CNGA1P29973 AC254562.1-201ENST00000417586 456 ntBASIC19.99■□□□□ 0.79
CNGA1P29973 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.99■□□□□ 0.79
CNGA1P29973 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.99■□□□□ 0.79
CNGA1P29973 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.99■□□□□ 0.79
CNGA1P29973 YBX1P5-201ENST00000509441 847 ntBASIC19.99■□□□□ 0.79
CNGA1P29973 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.99■□□□□ 0.79
CNGA1P29973 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.99■□□□□ 0.79
CNGA1P29973 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.99■□□□□ 0.79
CNGA1P29973 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.99■□□□□ 0.79
CNGA1P29973 MIR3197-201ENST00000582241 73 ntBASIC19.99■□□□□ 0.79
CNGA1P29973 AL589182.2-201ENST00000619332 1049 ntBASIC19.99■□□□□ 0.79
CNGA1P29973 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.99■□□□□ 0.79
CNGA1P29973 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CNGA1P29973 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CNGA1P29973 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.99■□□□□ 0.79
CNGA1P29973 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
CNGA1P29973 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNGA1P29973 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNGA1P29973 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNGA1P29973 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNGA1P29973 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNGA1P29973 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.98■□□□□ 0.79
CNGA1P29973 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CNGA1P29973 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.98■□□□□ 0.79
CNGA1P29973 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNGA1P29973 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNGA1P29973 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNGA1P29973 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.98■□□□□ 0.79
CNGA1P29973 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNGA1P29973 AC096633.1-201ENST00000422446 749 ntBASIC19.98■□□□□ 0.79
CNGA1P29973 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
CNGA1P29973 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.98■□□□□ 0.79
CNGA1P29973 CNN2P11-201ENST00000429351 262 ntBASIC19.98■□□□□ 0.79
CNGA1P29973 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.98■□□□□ 0.79
CNGA1P29973 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CNGA1P29973 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNGA1P29973 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.98■□□□□ 0.79
CNGA1P29973 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.98■□□□□ 0.79
CNGA1P29973 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.98■□□□□ 0.79
CNGA1P29973 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CNGA1P29973 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CNGA1P29973 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CNGA1P29973 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.98■□□□□ 0.79
CNGA1P29973 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.98■□□□□ 0.79
CNGA1P29973 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.98■□□□□ 0.79
CNGA1P29973 SIGLEC16-201ENST00000599858 1437 ntBASIC19.98■□□□□ 0.79
CNGA1P29973 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNGA1P29973 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.98■□□□□ 0.79
CNGA1P29973 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
CNGA1P29973 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNGA1P29973 AC093677.2-201ENST00000600169 1863 ntBASIC19.98■□□□□ 0.79
CNGA1P29973 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNGA1P29973 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
CNGA1P29973 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNGA1P29973 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNGA1P29973 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms