Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.17■□□□□ 0.18
SHC1P29353 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.17■□□□□ 0.18
SHC1P29353 AP005901.3-202ENST00000581653 237 ntBASIC16.17■□□□□ 0.18
SHC1P29353 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
SHC1P29353 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.17■□□□□ 0.18
SHC1P29353 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.17■□□□□ 0.18
SHC1P29353 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.17■□□□□ 0.18
SHC1P29353 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.17■□□□□ 0.18
SHC1P29353 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHC1P29353 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHC1P29353 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHC1P29353 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHC1P29353 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.17■□□□□ 0.18
SHC1P29353 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SHC1P29353 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHC1P29353 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHC1P29353 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHC1P29353 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHC1P29353 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SHC1P29353 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHC1P29353 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHC1P29353 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
SHC1P29353 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SHC1P29353 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SHC1P29353 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHC1P29353 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHC1P29353 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHC1P29353 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHC1P29353 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHC1P29353 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SHC1P29353 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.16■□□□□ 0.18
SHC1P29353 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.16■□□□□ 0.18
SHC1P29353 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.16■□□□□ 0.18
SHC1P29353 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.16■□□□□ 0.18
SHC1P29353 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.16■□□□□ 0.18
SHC1P29353 AC112698.1-201ENST00000510299 916 ntBASIC16.16■□□□□ 0.18
SHC1P29353 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SHC1P29353 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.16■□□□□ 0.18
SHC1P29353 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
SHC1P29353 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.16■□□□□ 0.18
SHC1P29353 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.16■□□□□ 0.18
SHC1P29353 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SHC1P29353 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.16■□□□□ 0.18
SHC1P29353 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SHC1P29353 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.16■□□□□ 0.18
SHC1P29353 AD000864.1-201ENST00000624076 2295 ntBASIC16.16■□□□□ 0.18
SHC1P29353 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.16■□□□□ 0.18
SHC1P29353 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHC1P29353 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SHC1P29353 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHC1P29353 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SHC1P29353 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHC1P29353 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHC1P29353 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHC1P29353 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.15■□□□□ 0.18
SHC1P29353 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHC1P29353 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
SHC1P29353 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHC1P29353 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHC1P29353 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHC1P29353 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHC1P29353 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SHC1P29353 DRAXINP1-201ENST00000437611 948 ntBASIC16.15■□□□□ 0.18
SHC1P29353 LINC00265-3P-201ENST00000447588 903 ntBASIC16.15■□□□□ 0.18
SHC1P29353 TOB2P1-201ENST00000469761 992 ntBASIC16.15■□□□□ 0.18
SHC1P29353 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.15■□□□□ 0.18
SHC1P29353 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.15■□□□□ 0.18
SHC1P29353 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.15■□□□□ 0.18
SHC1P29353 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SHC1P29353 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.15■□□□□ 0.18
SHC1P29353 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.15■□□□□ 0.18
SHC1P29353 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.15■□□□□ 0.18
SHC1P29353 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SHC1P29353 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SHC1P29353 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms