Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC087163.2-201ENST00000457299 853 ntBASIC19.68■□□□□ 0.74
CTGFP29279 AC125807.1-201ENST00000483097 614 ntBASIC19.68■□□□□ 0.74
CTGFP29279 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CTGFP29279 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.68■□□□□ 0.74
CTGFP29279 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.68■□□□□ 0.74
CTGFP29279 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.68■□□□□ 0.74
CTGFP29279 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTGFP29279 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CTGFP29279 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CTGFP29279 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTGFP29279 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTGFP29279 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTGFP29279 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTGFP29279 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.68■□□□□ 0.74
CTGFP29279 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTGFP29279 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTGFP29279 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTGFP29279 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTGFP29279 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTGFP29279 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTGFP29279 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.67■□□□□ 0.74
CTGFP29279 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTGFP29279 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTGFP29279 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.67■□□□□ 0.74
CTGFP29279 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.67■□□□□ 0.74
CTGFP29279 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTGFP29279 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.67■□□□□ 0.74
CTGFP29279 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.67■□□□□ 0.74
CTGFP29279 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.67■□□□□ 0.74
CTGFP29279 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTGFP29279 LINC01225-203ENST00000563550 1244 ntBASIC19.67■□□□□ 0.74
CTGFP29279 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.67■□□□□ 0.74
CTGFP29279 AL008721.1-201ENST00000609964 604 ntBASIC19.67■□□□□ 0.74
CTGFP29279 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
CTGFP29279 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTGFP29279 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTGFP29279 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTGFP29279 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.67■□□□□ 0.74
CTGFP29279 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTGFP29279 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTGFP29279 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.67■□□□□ 0.74
CTGFP29279 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CTGFP29279 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.66■□□□□ 0.74
CTGFP29279 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.66■□□□□ 0.74
CTGFP29279 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.66■□□□□ 0.74
CTGFP29279 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTGFP29279 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTGFP29279 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.66■□□□□ 0.74
CTGFP29279 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.66■□□□□ 0.74
CTGFP29279 SPDYE14P-201ENST00000442619 822 ntBASIC19.66■□□□□ 0.74
CTGFP29279 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.66■□□□□ 0.74
CTGFP29279 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.66■□□□□ 0.74
CTGFP29279 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.66■□□□□ 0.74
CTGFP29279 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTGFP29279 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.66■□□□□ 0.74
CTGFP29279 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CTGFP29279 AC026150.2-201ENST00000564693 1156 ntBASIC19.66■□□□□ 0.74
CTGFP29279 AC140878.1-201ENST00000565277 250 ntBASIC19.66■□□□□ 0.74
CTGFP29279 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTGFP29279 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.66■□□□□ 0.74
CTGFP29279 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.66■□□□□ 0.74
CTGFP29279 AC073592.3-201ENST00000625118 1834 ntBASIC19.66■□□□□ 0.74
CTGFP29279 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTGFP29279 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTGFP29279 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTGFP29279 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTGFP29279 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTGFP29279 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTGFP29279 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.66■□□□□ 0.74
CTGFP29279 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTGFP29279 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTGFP29279 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.65■□□□□ 0.74
CTGFP29279 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.65■□□□□ 0.74
CTGFP29279 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTGFP29279 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTGFP29279 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.65■□□□□ 0.74
CTGFP29279 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.65■□□□□ 0.74
CTGFP29279 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.65■□□□□ 0.74
CTGFP29279 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.65■□□□□ 0.74
CTGFP29279 AC107918.2-201ENST00000530817 355 ntBASIC19.65■□□□□ 0.74
CTGFP29279 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.65■□□□□ 0.74
CTGFP29279 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.65■□□□□ 0.74
CTGFP29279 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.65■□□□□ 0.74
CTGFP29279 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTGFP29279 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTGFP29279 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTGFP29279 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTGFP29279 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTGFP29279 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTGFP29279 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CTGFP29279 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTGFP29279 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.65■□□□□ 0.74
CTGFP29279 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTGFP29279 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CTGFP29279 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CTGFP29279 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CTGFP29279 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.64■□□□□ 0.74
CTGFP29279 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTGFP29279 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.64■□□□□ 0.73
CTGFP29279 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms