Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KCNA3P22001 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNA3P22001 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.41■■□□□ 1.02
KCNA3P22001 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNA3P22001 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNA3P22001 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
KCNA3P22001 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
KCNA3P22001 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.41■■□□□ 1.02
KCNA3P22001 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNA3P22001 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KCNA3P22001 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.41■■□□□ 1.02
KCNA3P22001 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.41■■□□□ 1.02
KCNA3P22001 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
KCNA3P22001 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KCNA3P22001 AC097493.3-201ENST00000509725 367 ntBASIC21.41■■□□□ 1.02
KCNA3P22001 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KCNA3P22001 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.41■■□□□ 1.02
KCNA3P22001 AL596325.1-201ENST00000563991 1082 ntBASIC21.41■■□□□ 1.02
KCNA3P22001 AC026150.2-201ENST00000564693 1156 ntBASIC21.41■■□□□ 1.02
KCNA3P22001 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNA3P22001 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
KCNA3P22001 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC21.41■■□□□ 1.02
KCNA3P22001 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNA3P22001 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KCNA3P22001 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.41■■□□□ 1.02
KCNA3P22001 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KCNA3P22001 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
KCNA3P22001 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
KCNA3P22001 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.41■■□□□ 1.02
KCNA3P22001 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.41■■□□□ 1.02
KCNA3P22001 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.41■■□□□ 1.02
KCNA3P22001 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.41■■□□□ 1.02
KCNA3P22001 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.4■■□□□ 1.02
KCNA3P22001 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KCNA3P22001 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KCNA3P22001 SPDYE14P-201ENST00000442619 822 ntBASIC21.4■■□□□ 1.02
KCNA3P22001 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.4■■□□□ 1.02
KCNA3P22001 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
KCNA3P22001 RN7SL589P-201ENST00000481268 310 ntBASIC21.4■■□□□ 1.02
KCNA3P22001 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21.4■■□□□ 1.02
KCNA3P22001 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.4■■□□□ 1.02
KCNA3P22001 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.4■■□□□ 1.02
KCNA3P22001 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KCNA3P22001 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC21.4■■□□□ 1.02
KCNA3P22001 BSG-214ENST00000614867 960 ntTSL 3 BASIC21.4■■□□□ 1.02
KCNA3P22001 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KCNA3P22001 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
KCNA3P22001 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KCNA3P22001 AC126763.1-201ENST00000552015 2118 ntBASIC21.4■■□□□ 1.02
KCNA3P22001 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
KCNA3P22001 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
KCNA3P22001 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
KCNA3P22001 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
KCNA3P22001 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
KCNA3P22001 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
KCNA3P22001 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KCNA3P22001 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNA3P22001 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
KCNA3P22001 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNA3P22001 AC022494.1-201ENST00000466044 728 ntBASIC21.39■■□□□ 1.01
KCNA3P22001 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KCNA3P22001 AL158211.3-201ENST00000607385 239 ntBASIC21.39■■□□□ 1.01
KCNA3P22001 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KCNA3P22001 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KCNA3P22001 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNA3P22001 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.39■■□□□ 1.01
KCNA3P22001 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNA3P22001 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.38■■□□□ 1.01
KCNA3P22001 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.38■■□□□ 1.01
KCNA3P22001 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNA3P22001 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KCNA3P22001 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
KCNA3P22001 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KCNA3P22001 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.38■■□□□ 1.01
KCNA3P22001 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KCNA3P22001 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.38■■□□□ 1.01
KCNA3P22001 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.38■■□□□ 1.01
KCNA3P22001 SERBP1P5-201ENST00000510079 1181 ntBASIC21.38■■□□□ 1.01
KCNA3P22001 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.38■■□□□ 1.01
KCNA3P22001 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNA3P22001 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.38■■□□□ 1.01
KCNA3P22001 MIR6752-201ENST00000618442 71 ntBASIC21.38■■□□□ 1.01
KCNA3P22001 SRP9-204ENST00000619790 377 ntTSL 2 BASIC21.38■■□□□ 1.01
KCNA3P22001 AC084121.4-201ENST00000641598 221 ntBASIC21.38■■□□□ 1.01
KCNA3P22001 AF228730.8-201ENST00000642140 221 ntBASIC21.38■■□□□ 1.01
KCNA3P22001 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNA3P22001 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KCNA3P22001 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNA3P22001 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNA3P22001 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.38■■□□□ 1.01
KCNA3P22001 BX276092.7-203ENST00000637198 1536 ntBASIC21.38■■□□□ 1.01
KCNA3P22001 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KCNA3P22001 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNA3P22001 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.38■■□□□ 1.01
KCNA3P22001 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNA3P22001 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNA3P22001 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNA3P22001 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.37■■□□□ 1.01
KCNA3P22001 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.37■■□□□ 1.01
KCNA3P22001 AKAP8P1-201ENST00000434743 1349 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms