Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.49■□□□□ 0.55
PDGFRAP16234 AC005104.2-201ENST00000427818 678 ntBASIC18.49■□□□□ 0.55
PDGFRAP16234 KRT17P6-201ENST00000453795 1220 ntBASIC18.49■□□□□ 0.55
PDGFRAP16234 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.49■□□□□ 0.55
PDGFRAP16234 AC104819.1-201ENST00000504587 486 ntBASIC18.49■□□□□ 0.55
PDGFRAP16234 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.49■□□□□ 0.55
PDGFRAP16234 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.49■□□□□ 0.55
PDGFRAP16234 AC009533.2-201ENST00000543664 586 ntBASIC18.49■□□□□ 0.55
PDGFRAP16234 AC012615.1-201ENST00000565797 1299 ntBASIC18.49■□□□□ 0.55
PDGFRAP16234 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.49■□□□□ 0.55
PDGFRAP16234 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
PDGFRAP16234 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.49■□□□□ 0.55
PDGFRAP16234 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.49■□□□□ 0.55
PDGFRAP16234 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.49■□□□□ 0.55
PDGFRAP16234 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.49■□□□□ 0.55
PDGFRAP16234 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.49■□□□□ 0.55
PDGFRAP16234 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
PDGFRAP16234 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 PP12613-201ENST00000424958 2230 ntBASIC18.49■□□□□ 0.55
PDGFRAP16234 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFRAP16234 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PDGFRAP16234 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
PDGFRAP16234 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PDGFRAP16234 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PDGFRAP16234 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFRAP16234 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFRAP16234 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.48■□□□□ 0.55
PDGFRAP16234 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFRAP16234 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.48■□□□□ 0.55
PDGFRAP16234 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFRAP16234 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFRAP16234 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFRAP16234 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PDGFRAP16234 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
PDGFRAP16234 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFRAP16234 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PDGFRAP16234 MINOS1P3-201ENST00000457048 203 ntBASIC18.48■□□□□ 0.55
PDGFRAP16234 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.48■□□□□ 0.55
PDGFRAP16234 KRT126P-201ENST00000549467 1181 ntBASIC18.48■□□□□ 0.55
PDGFRAP16234 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.48■□□□□ 0.55
PDGFRAP16234 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.48■□□□□ 0.55
PDGFRAP16234 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.48■□□□□ 0.55
PDGFRAP16234 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFRAP16234 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.48■□□□□ 0.55
PDGFRAP16234 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFRAP16234 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.48■□□□□ 0.55
PDGFRAP16234 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFRAP16234 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFRAP16234 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.48■□□□□ 0.55
PDGFRAP16234 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFRAP16234 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PDGFRAP16234 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFRAP16234 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFRAP16234 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.47■□□□□ 0.55
PDGFRAP16234 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PDGFRAP16234 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
PDGFRAP16234 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFRAP16234 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFRAP16234 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.47■□□□□ 0.55
PDGFRAP16234 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFRAP16234 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PDGFRAP16234 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFRAP16234 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFRAP16234 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFRAP16234 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFRAP16234 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PDGFRAP16234 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.47■□□□□ 0.55
PDGFRAP16234 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.47■□□□□ 0.55
PDGFRAP16234 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.47■□□□□ 0.55
PDGFRAP16234 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.47■□□□□ 0.55
PDGFRAP16234 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFRAP16234 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFRAP16234 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
PDGFRAP16234 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
PDGFRAP16234 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.47■□□□□ 0.55
PDGFRAP16234 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFRAP16234 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFRAP16234 AL138688.1-201ENST00000624851 1594 ntBASIC18.47■□□□□ 0.55
PDGFRAP16234 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFRAP16234 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFRAP16234 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFRAP16234 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFRAP16234 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFRAP16234 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFRAP16234 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.46■□□□□ 0.55
PDGFRAP16234 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFRAP16234 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.46■□□□□ 0.55
PDGFRAP16234 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms