Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CFTRP13569 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC29.82■■■□□ 2.36
CFTRP13569 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
CFTRP13569 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC29.82■■■□□ 2.36
CFTRP13569 POR-209ENST00000439269 1858 ntTSL 2 BASIC29.82■■■□□ 2.36
CFTRP13569 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC29.82■■■□□ 2.36
CFTRP13569 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CFTRP13569 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC29.82■■■□□ 2.36
CFTRP13569 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CFTRP13569 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
CFTRP13569 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
CFTRP13569 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CFTRP13569 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CFTRP13569 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC29.81■■■□□ 2.36
CFTRP13569 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC29.81■■■□□ 2.36
CFTRP13569 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CFTRP13569 CD81-202ENST00000381036 880 ntTSL 3 BASIC29.81■■■□□ 2.36
CFTRP13569 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CFTRP13569 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CFTRP13569 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC29.81■■■□□ 2.36
CFTRP13569 SERBP1P5-201ENST00000510079 1181 ntBASIC29.81■■■□□ 2.36
CFTRP13569 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CFTRP13569 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC29.81■■■□□ 2.36
CFTRP13569 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC29.81■■■□□ 2.36
CFTRP13569 CD7-202ENST00000578509 925 ntTSL 3 BASIC29.81■■■□□ 2.36
CFTRP13569 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC29.81■■■□□ 2.36
CFTRP13569 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
CFTRP13569 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CFTRP13569 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
CFTRP13569 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC29.81■■■□□ 2.36
CFTRP13569 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CFTRP13569 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC29.81■■■□□ 2.36
CFTRP13569 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC29.81■■■□□ 2.36
CFTRP13569 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC29.81■■■□□ 2.36
CFTRP13569 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
CFTRP13569 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC29.81■■■□□ 2.36
CFTRP13569 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
CFTRP13569 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
CFTRP13569 AMT-250ENST00000637682 1823 ntTSL 5 BASIC29.81■■■□□ 2.36
CFTRP13569 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
CFTRP13569 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CFTRP13569 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC29.8■■■□□ 2.36
CFTRP13569 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC29.8■■■□□ 2.36
CFTRP13569 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC29.8■■■□□ 2.36
CFTRP13569 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC29.8■■■□□ 2.36
CFTRP13569 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC29.8■■■□□ 2.36
CFTRP13569 AC097493.3-201ENST00000509725 367 ntBASIC29.8■■■□□ 2.36
CFTRP13569 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
CFTRP13569 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC29.8■■■□□ 2.36
CFTRP13569 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC29.8■■■□□ 2.36
CFTRP13569 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
CFTRP13569 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC29.8■■■□□ 2.36
CFTRP13569 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC29.8■■■□□ 2.36
CFTRP13569 SSH2-211ENST00000590153 570 ntTSL 4 BASIC29.8■■■□□ 2.36
CFTRP13569 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
CFTRP13569 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC29.8■■■□□ 2.36
CFTRP13569 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
CFTRP13569 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CFTRP13569 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC29.8■■■□□ 2.36
CFTRP13569 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
CFTRP13569 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC29.8■■■□□ 2.36
CFTRP13569 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CFTRP13569 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CFTRP13569 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC29.8■■■□□ 2.36
CFTRP13569 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
CFTRP13569 SPDYE7P-202ENST00000420373 878 ntBASIC29.8■■■□□ 2.36
CFTRP13569 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CFTRP13569 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CFTRP13569 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CFTRP13569 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CFTRP13569 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC29.8■■■□□ 2.36
CFTRP13569 NAA50-208ENST00000497255 789 ntTSL 5 BASIC29.8■■■□□ 2.36
CFTRP13569 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC29.8■■■□□ 2.36
CFTRP13569 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
CFTRP13569 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
CFTRP13569 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CFTRP13569 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
CFTRP13569 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CFTRP13569 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC29.79■■■□□ 2.36
CFTRP13569 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CFTRP13569 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CFTRP13569 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CFTRP13569 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CFTRP13569 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CFTRP13569 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
CFTRP13569 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC29.79■■■□□ 2.36
CFTRP13569 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CFTRP13569 CALY-202ENST00000368555 783 ntTSL 2 BASIC29.79■■■□□ 2.36
CFTRP13569 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC29.79■■■□□ 2.36
CFTRP13569 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CFTRP13569 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CFTRP13569 AC069120.2-201ENST00000524091 540 ntBASIC29.79■■■□□ 2.36
CFTRP13569 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC29.79■■■□□ 2.36
CFTRP13569 COQ9-214ENST00000567933 882 ntTSL 3 BASIC29.79■■■□□ 2.36
CFTRP13569 MIR4515-201ENST00000584082 81 ntBASIC29.79■■■□□ 2.36
CFTRP13569 AL009183.1-201ENST00000603760 355 ntBASIC29.79■■■□□ 2.36
CFTRP13569 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CFTRP13569 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC29.79■■■□□ 2.36
CFTRP13569 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CFTRP13569 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms