Protein–RNA interactions for Protein: P0CW24

PNMA6A, Paraneoplastic antigen-like protein 6A, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6AP0CW24 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 RNF152P1-201ENST00000397754 604 ntBASIC19.28■□□□□ 0.68
PNMA6AP0CW24 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 AC112907.2-201ENST00000448639 330 ntBASIC19.28■□□□□ 0.68
PNMA6AP0CW24 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 KRT8P47-201ENST00000604727 1398 ntBASIC19.28■□□□□ 0.68
PNMA6AP0CW24 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PNMA6AP0CW24 AC009949.1-201ENST00000623048 1830 ntBASIC19.28■□□□□ 0.68
PNMA6AP0CW24 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 AC105020.1-201ENST00000435356 2205 ntBASIC19.27■□□□□ 0.68
PNMA6AP0CW24 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 SPDYE13P-201ENST00000445314 798 ntBASIC19.27■□□□□ 0.68
PNMA6AP0CW24 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 AC113404.2-201ENST00000507884 177 ntBASIC19.27■□□□□ 0.68
PNMA6AP0CW24 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PNMA6AP0CW24 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PNMA6AP0CW24 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PNMA6AP0CW24 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PNMA6AP0CW24 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PNMA6AP0CW24 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 DOC2GP-204ENST00000639052 2548 ntBASIC19.26■□□□□ 0.67
PNMA6AP0CW24 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 HBZP1-201ENST00000354915 429 ntBASIC19.26■□□□□ 0.67
PNMA6AP0CW24 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PNMA6AP0CW24 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PNMA6AP0CW24 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms