Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FREM3P0C091 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
FREM3P0C091 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FREM3P0C091 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FREM3P0C091 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.99■□□□□ 0.15
FREM3P0C091 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.99■□□□□ 0.15
FREM3P0C091 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FREM3P0C091 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.99■□□□□ 0.15
FREM3P0C091 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.99■□□□□ 0.15
FREM3P0C091 AC114341.1-201ENST00000618070 349 ntBASIC15.99■□□□□ 0.15
FREM3P0C091 AL139288.1-201ENST00000623748 933 ntBASIC15.99■□□□□ 0.15
FREM3P0C091 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FREM3P0C091 LINC00304-203ENST00000565008 1864 ntBASIC15.99■□□□□ 0.15
FREM3P0C091 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.99■□□□□ 0.15
FREM3P0C091 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
FREM3P0C091 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
FREM3P0C091 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
FREM3P0C091 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.99■□□□□ 0.15
FREM3P0C091 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
FREM3P0C091 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FREM3P0C091 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.99■□□□□ 0.15
FREM3P0C091 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FREM3P0C091 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
FREM3P0C091 AC006116.8-202ENST00000587620 1550 ntBASIC15.98■□□□□ 0.15
FREM3P0C091 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.98■□□□□ 0.15
FREM3P0C091 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
FREM3P0C091 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.98■□□□□ 0.15
FREM3P0C091 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.98■□□□□ 0.15
FREM3P0C091 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
FREM3P0C091 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
FREM3P0C091 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.98■□□□□ 0.15
FREM3P0C091 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.98■□□□□ 0.15
FREM3P0C091 PMPCAP1-201ENST00000508114 1576 ntBASIC15.98■□□□□ 0.15
FREM3P0C091 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.98■□□□□ 0.15
FREM3P0C091 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.98■□□□□ 0.15
FREM3P0C091 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.98■□□□□ 0.15
FREM3P0C091 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.98■□□□□ 0.15
FREM3P0C091 AF186996.4-201ENST00000467186 377 ntBASIC15.98■□□□□ 0.15
FREM3P0C091 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.98■□□□□ 0.15
FREM3P0C091 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.98■□□□□ 0.15
FREM3P0C091 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.98■□□□□ 0.15
FREM3P0C091 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.98■□□□□ 0.15
FREM3P0C091 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FREM3P0C091 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.98■□□□□ 0.15
FREM3P0C091 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.98■□□□□ 0.15
FREM3P0C091 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.97■□□□□ 0.15
FREM3P0C091 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
FREM3P0C091 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
FREM3P0C091 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.97■□□□□ 0.15
FREM3P0C091 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 AL022342.1-201ENST00000400363 863 ntBASIC15.97■□□□□ 0.15
FREM3P0C091 RBM17P3-201ENST00000417687 1192 ntBASIC15.97■□□□□ 0.15
FREM3P0C091 AC103564.2-201ENST00000432853 1299 ntBASIC15.97■□□□□ 0.15
FREM3P0C091 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.97■□□□□ 0.15
FREM3P0C091 AC132008.2-207ENST00000454517 770 ntBASIC15.97■□□□□ 0.15
FREM3P0C091 AC122714.2-201ENST00000502787 707 ntBASIC15.97■□□□□ 0.15
FREM3P0C091 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.97■□□□□ 0.15
FREM3P0C091 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.97■□□□□ 0.15
FREM3P0C091 MTDHP4-201ENST00000600287 670 ntBASIC15.97■□□□□ 0.15
FREM3P0C091 AC008735.5-201ENST00000623544 497 ntBASIC15.97■□□□□ 0.15
FREM3P0C091 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
FREM3P0C091 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.97■□□□□ 0.15
FREM3P0C091 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
FREM3P0C091 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms