Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.69■□□□□ 0.42
APOA4P06727 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
APOA4P06727 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
APOA4P06727 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.69■□□□□ 0.42
APOA4P06727 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.69■□□□□ 0.42
APOA4P06727 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.69■□□□□ 0.42
APOA4P06727 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.69■□□□□ 0.42
APOA4P06727 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.69■□□□□ 0.42
APOA4P06727 AC005332.1-201ENST00000577698 1310 ntBASIC17.69■□□□□ 0.42
APOA4P06727 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.69■□□□□ 0.42
APOA4P06727 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
APOA4P06727 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
APOA4P06727 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APOA4P06727 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOA4P06727 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOA4P06727 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
APOA4P06727 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APOA4P06727 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APOA4P06727 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
APOA4P06727 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
APOA4P06727 ARMC10P1-201ENST00000313754 855 ntBASIC17.68■□□□□ 0.42
APOA4P06727 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
APOA4P06727 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.68■□□□□ 0.42
APOA4P06727 CROCCP2-202ENST00000412962 2773 ntBASIC17.68■□□□□ 0.42
APOA4P06727 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOA4P06727 TSPY22P-201ENST00000427496 604 ntBASIC17.68■□□□□ 0.42
APOA4P06727 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOA4P06727 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APOA4P06727 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APOA4P06727 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.68■□□□□ 0.42
APOA4P06727 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
APOA4P06727 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.68■□□□□ 0.42
APOA4P06727 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
APOA4P06727 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.68■□□□□ 0.42
APOA4P06727 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOA4P06727 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.68■□□□□ 0.42
APOA4P06727 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.68■□□□□ 0.42
APOA4P06727 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APOA4P06727 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.68■□□□□ 0.42
APOA4P06727 PCDHA12-202ENST00000613593 2588 ntBASIC17.68■□□□□ 0.42
APOA4P06727 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOA4P06727 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
APOA4P06727 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOA4P06727 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
APOA4P06727 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.68■□□□□ 0.42
APOA4P06727 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.67■□□□□ 0.42
APOA4P06727 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA4P06727 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA4P06727 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA4P06727 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APOA4P06727 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA4P06727 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA4P06727 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
APOA4P06727 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.67■□□□□ 0.42
APOA4P06727 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA4P06727 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA4P06727 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.67■□□□□ 0.42
APOA4P06727 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA4P06727 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APOA4P06727 DDX43P3-201ENST00000441064 443 ntBASIC17.67■□□□□ 0.42
APOA4P06727 AL445228.2-201ENST00000605589 952 ntBASIC17.67■□□□□ 0.42
APOA4P06727 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
APOA4P06727 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.67■□□□□ 0.42
APOA4P06727 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
APOA4P06727 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APOA4P06727 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
APOA4P06727 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APOA4P06727 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
APOA4P06727 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA4P06727 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA4P06727 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOA4P06727 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOA4P06727 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APOA4P06727 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.66■□□□□ 0.42
APOA4P06727 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOA4P06727 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOA4P06727 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APOA4P06727 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.66■□□□□ 0.42
APOA4P06727 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.66■□□□□ 0.42
APOA4P06727 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
APOA4P06727 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.66■□□□□ 0.42
APOA4P06727 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
APOA4P06727 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOA4P06727 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.66■□□□□ 0.42
APOA4P06727 PCED1CP-201ENST00000419887 785 ntBASIC17.66■□□□□ 0.42
APOA4P06727 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.66■□□□□ 0.42
APOA4P06727 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.66■□□□□ 0.42
APOA4P06727 GUSBP12-201ENST00000513727 720 ntBASIC17.66■□□□□ 0.42
APOA4P06727 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOA4P06727 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOA4P06727 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOA4P06727 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms